mirror of https://github.com/ecmwf/eccodes.git
1848 lines
52 KiB
C
1848 lines
52 KiB
C
/*
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* (C) Copyright 2005- ECMWF.
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*
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* This software is licensed under the terms of the Apache Licence Version 2.0
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* which can be obtained at http://www.apache.org/licenses/LICENSE-2.0.
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*
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* In applying this licence, ECMWF does not waive the privileges and immunities granted to it by
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* virtue of its status as an intergovernmental organisation nor does it submit to any jurisdiction.
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*/
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#include "grib_api_internal.h"
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#if GRIB_PTHREADS
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static pthread_once_t once = PTHREAD_ONCE_INIT;
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static pthread_mutex_t mutex1 = PTHREAD_MUTEX_INITIALIZER;
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static pthread_mutex_t mutex2 = PTHREAD_MUTEX_INITIALIZER;
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static void init()
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{
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pthread_mutexattr_t attr;
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pthread_mutexattr_init(&attr);
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pthread_mutexattr_settype(&attr, PTHREAD_MUTEX_RECURSIVE);
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pthread_mutex_init(&mutex1, &attr);
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pthread_mutex_init(&mutex2, &attr);
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pthread_mutexattr_destroy(&attr);
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}
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#elif GRIB_OMP_THREADS
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static int once = 0;
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static omp_nest_lock_t mutex1;
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static omp_nest_lock_t mutex2;
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static void init()
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{
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GRIB_OMP_CRITICAL(lock_grib_io_c)
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{
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if (once == 0) {
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omp_init_nest_lock(&mutex1);
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omp_init_nest_lock(&mutex2);
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once = 1;
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}
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}
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}
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#endif
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#define GRIB 0x47524942
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#define BUDG 0x42554447
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#define DIAG 0x44494147
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#define TIDE 0x54494445
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#define BUFR 0x42554652
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#define HDF5 0x89484446
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#define WRAP 0x57524150
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#define ECCODES_READS_BUFR 1
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#define ECCODES_READS_HDF5 1
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#define ECCODES_READS_WRAP 1
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typedef struct alloc_buffer
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{
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size_t size;
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void* buffer;
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} alloc_buffer;
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typedef size_t (*readproc)(void*, void*, size_t, int*);
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typedef int (*seekproc)(void*, off_t);
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typedef off_t (*tellproc)(void*);
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typedef void* (*allocproc)(void*, size_t*, int*);
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typedef struct reader
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{
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void* read_data;
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readproc read;
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void* alloc_data;
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allocproc alloc;
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int headers_only;
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seekproc seek;
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seekproc seek_from_start;
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tellproc tell;
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off_t offset;
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size_t message_size;
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} reader;
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static int read_the_rest(reader* r, size_t message_length, unsigned char* tmp, int already_read, int check7777)
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{
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int err = GRIB_SUCCESS;
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size_t buffer_size;
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size_t rest;
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unsigned char* buffer;
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grib_context* c = grib_context_get_default();
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if (message_length == 0)
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return GRIB_BUFFER_TOO_SMALL;
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buffer_size = message_length;
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rest = message_length - already_read;
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r->message_size = message_length;
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buffer = (unsigned char*)r->alloc(r->alloc_data, &buffer_size, &err);
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if (err)
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return err;
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if (buffer == NULL || (buffer_size < message_length)) {
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return GRIB_BUFFER_TOO_SMALL;
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}
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memcpy(buffer, tmp, already_read);
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if ((r->read(r->read_data, buffer + already_read, rest, &err) != rest) || err) {
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/*fprintf(stderr, "read_the_rest: r->read failed: %s\n", grib_get_error_message(err));*/
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if (c->debug)
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fprintf(stderr, "ECCODES DEBUG read_the_rest: Read failed (Coded length=%lu, Already read=%d)\n",
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message_length, already_read);
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return err;
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}
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if (check7777 && !r->headers_only &&
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(buffer[message_length - 4] != '7' ||
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buffer[message_length - 3] != '7' ||
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buffer[message_length - 2] != '7' ||
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buffer[message_length - 1] != '7'))
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{
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if (c->debug)
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fprintf(stderr, "ECCODES DEBUG read_the_rest: No final 7777 at expected location (Coded length=%lu)\n", message_length);
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return GRIB_WRONG_LENGTH;
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}
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return GRIB_SUCCESS;
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}
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#define CHECK_TMP_SIZE(a) \
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if (sizeof(tmp) < (a)) { \
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fprintf(stderr, "%s:%d sizeof(tmp)<%s %d<%d\n", __FILE__, __LINE__, #a, (int)sizeof(tmp), (int)(a)); \
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return GRIB_INTERNAL_ARRAY_TOO_SMALL; \
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}
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#define GROW_BUF_IF_REQUIRED(desired_length) \
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if (buf->length < (desired_length)) { \
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grib_grow_buffer(c, buf, desired_length); \
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tmp = buf->data; \
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}
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#define UINT3(a, b, c) (size_t)((a << 16) + (b << 8) + c);
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static int read_GRIB(reader* r)
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{
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unsigned char* tmp = NULL;
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size_t length = 0;
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size_t total_length = 0;
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long edition = 0;
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int err = 0;
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int i = 0, j;
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size_t sec1len = 0;
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size_t sec2len = 0;
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size_t sec3len = 0;
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size_t sec4len = 0;
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unsigned long flags;
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size_t buflen = 32768; /* See ECC-515: was 16368 */
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grib_context* c;
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grib_buffer* buf;
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/*TODO proper context*/
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c = grib_context_get_default();
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tmp = (unsigned char*)malloc(buflen);
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if (!tmp)
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return GRIB_OUT_OF_MEMORY;
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buf = grib_new_buffer(c, tmp, buflen);
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buf->property = GRIB_MY_BUFFER;
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tmp[i++] = 'G';
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tmp[i++] = 'R';
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tmp[i++] = 'I';
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tmp[i++] = 'B';
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r->offset = r->tell(r->read_data) - 4;
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if (r->read(r->read_data, &tmp[i], 3, &err) != 3 || err)
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return err;
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length = UINT3(tmp[i], tmp[i + 1], tmp[i + 2]);
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i += 3;
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/* Edition number */
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if (r->read(r->read_data, &tmp[i], 1, &err) != 1 || err)
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return err;
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edition = tmp[i++];
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switch (edition) {
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case 1:
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if (r->headers_only) {
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/* Read section 1 length */
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if (r->read(r->read_data, &tmp[i], 3, &err) != 3 || err)
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return err;
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sec1len = UINT3(tmp[i], tmp[i + 1], tmp[i + 2]);
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i += 3;
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/* Read section 1. 3 = length */
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if ((r->read(r->read_data, tmp + i, sec1len - 3, &err) != sec1len - 3) || err)
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return err;
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flags = tmp[15];
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i += sec1len - 3;
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GROW_BUF_IF_REQUIRED(i + 3);
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if (flags & (1 << 7)) {
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/* Section 2 */
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if (r->read(r->read_data, &tmp[i], 3, &err) != 3 || err)
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return err;
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sec2len = UINT3(tmp[i], tmp[i + 1], tmp[i + 2]);
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GROW_BUF_IF_REQUIRED(i + sec2len);
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i += 3;
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/* Read section 2 */
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if ((r->read(r->read_data, tmp + i, sec2len - 3, &err) != sec2len - 3) || err)
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return err;
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i += sec2len - 3;
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}
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if (flags & (1 << 6)) {
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/* Section 3 */
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GROW_BUF_IF_REQUIRED(i + 3);
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for (j = 0; j < 3; j++) {
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if (r->read(r->read_data, &tmp[i], 1, &err) != 1 || err)
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return err;
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sec3len <<= 8;
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sec3len |= tmp[i];
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i++;
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}
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/* Read section 3 */
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GROW_BUF_IF_REQUIRED(i + sec3len);
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if ((r->read(r->read_data, tmp + i, sec3len - 3, &err) != sec3len - 3) || err)
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return err;
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i += sec3len - 3;
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}
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GROW_BUF_IF_REQUIRED(i + 11);
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/* Section 4 */
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for (j = 0; j < 3; j++) {
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if (r->read(r->read_data, &tmp[i], 1, &err) != 1 || err)
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return err;
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sec4len <<= 8;
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sec4len |= tmp[i];
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i++;
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}
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/* we don't read the data, only headers */
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if ((r->read(r->read_data, tmp + i, 8, &err) != 8) || err)
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return err;
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i += 8;
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total_length = length;
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/* length=8+sec1len + sec2len+sec3len+11; */
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length = i;
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err = r->seek(r->read_data, total_length - length - 1);
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}
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else if (length & 0x800000) {
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/* Large GRIBs */
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/* Read section 1 length */
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for (j = 0; j < 3; j++) {
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if (r->read(r->read_data, &tmp[i], 1, &err) != 1 || err)
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return err;
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sec1len <<= 8;
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sec1len |= tmp[i];
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i++;
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}
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/* table version */
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if (r->read(r->read_data, &tmp[i++], 1, &err) != 1 || err)
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return err;
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/* center */
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if (r->read(r->read_data, &tmp[i++], 1, &err) != 1 || err)
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return err;
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/* process */
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if (r->read(r->read_data, &tmp[i++], 1, &err) != 1 || err)
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return err;
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/* grid */
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if (r->read(r->read_data, &tmp[i++], 1, &err) != 1 || err)
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return err;
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/* flags */
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if (r->read(r->read_data, &tmp[i], 1, &err) != 1 || err)
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return err;
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flags = tmp[i++];
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/* fprintf(stderr," sec1len=%d i=%d flags=%x\n",sec1len,i,flags); */
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GROW_BUF_IF_REQUIRED(8 + sec1len + 4 + 3);
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/* Read section 1. 3 = length, 5 = table,center,process,grid,flags */
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if ((r->read(r->read_data, tmp + i, sec1len - 3 - 5, &err) != sec1len - 3 - 5) || err)
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return err;
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i += sec1len - 3 - 5;
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if (flags & (1 << 7)) {
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/* Section 2 */
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for (j = 0; j < 3; j++) {
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if (r->read(r->read_data, &tmp[i], 1, &err) != 1 || err)
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return err;
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sec2len <<= 8;
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sec2len |= tmp[i];
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i++;
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}
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/* Read section 2 */
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GROW_BUF_IF_REQUIRED(i + sec2len);
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if ((r->read(r->read_data, tmp + i, sec2len - 3, &err) != sec2len - 3) || err)
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return err;
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i += sec2len - 3;
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}
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GROW_BUF_IF_REQUIRED(sec1len + sec2len + 4 + 3);
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if (flags & (1 << 6)) {
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/* Section 3 */
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for (j = 0; j < 3; j++) {
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if (r->read(r->read_data, &tmp[i], 1, &err) != 1 || err)
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return err;
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sec3len <<= 8;
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sec3len |= tmp[i];
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i++;
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}
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/* Read section 3 */
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GROW_BUF_IF_REQUIRED(sec1len + sec2len + sec3len + 4 + 3);
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if ((r->read(r->read_data, tmp + i, sec3len - 3, &err) != sec3len - 3) || err)
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return err;
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i += sec3len - 3;
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}
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/* fprintf(stderr,"%s sec1len=%d i=%d\n",type,sec1len,i); */
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GROW_BUF_IF_REQUIRED(sec1len + sec2len + sec3len + 4 + 3);
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for (j = 0; j < 3; j++) {
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if (r->read(r->read_data, &tmp[i], 1, &err) != 1 || err)
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return err;
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sec4len <<= 8;
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sec4len |= tmp[i];
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i++;
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}
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if (sec4len < 120) {
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/* Special coding */
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length &= 0x7fffff;
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length *= 120;
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length -= sec4len;
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length += 4;
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}
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else {
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/* length is already set to the right value */
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}
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}
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break;
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case 2:
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case 3:
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length = 0;
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if (sizeof(long) >= 8) {
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for (j = 0; j < 8; j++) {
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if (r->read(r->read_data, &tmp[i], 1, &err) != 1 || err)
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return err;
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length <<= 8;
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length |= tmp[i];
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i++;
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}
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}
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else {
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/* Check if the length fits in a long */
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for (j = 0; j < 4; j++) {
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if (r->read(r->read_data, &tmp[i], 1, &err) != 1 || err)
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return err;
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length <<= 8;
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length |= tmp[i];
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i++;
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}
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if (length)
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return GRIB_MESSAGE_TOO_LARGE; /* Message too large */
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for (j = 0; j < 4; j++) {
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if (r->read(r->read_data, &tmp[i], 1, &err) != 1 || err)
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return err;
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length <<= 8;
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length |= tmp[i];
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i++;
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}
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}
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break;
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default:
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r->seek_from_start(r->read_data, r->offset + 4);
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grib_buffer_delete(c, buf);
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return GRIB_UNSUPPORTED_EDITION;
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break;
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}
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/* Assert(i <= buf->length); */
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err = read_the_rest(r, length, tmp, i, 1);
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if (err)
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r->seek_from_start(r->read_data, r->offset + 4);
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grib_buffer_delete(c, buf);
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return err;
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}
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static int read_PSEUDO(reader* r, const char* type)
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{
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unsigned char tmp[32]; /* Should be enough */
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size_t sec1len = 0;
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size_t sec4len = 0;
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int err = 0;
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int i = 0, j = 0;
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Assert(strlen(type) == 4);
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for (j = 0; j < 4; j++) {
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tmp[i] = type[i];
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i++;
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}
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for (j = 0; j < 3; j++) {
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if (r->read(r->read_data, &tmp[i], 1, &err) != 1 || err)
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return err;
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sec1len <<= 8;
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sec1len |= tmp[i];
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i++;
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}
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/* fprintf(stderr,"%s sec1len=%d i=%d\n",type,sec1len,i); */
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CHECK_TMP_SIZE(sec1len + 4 + 3);
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/* Read sectoin1 */
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if ((r->read(r->read_data, tmp + i, sec1len - 3, &err) != sec1len - 3) || err)
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return err;
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i += sec1len - 3;
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for (j = 0; j < 3; j++) {
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if (r->read(r->read_data, &tmp[i], 1, &err) != 1 || err)
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return err;
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sec4len <<= 8;
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sec4len |= tmp[i];
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i++;
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}
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/* fprintf(stderr,"%s sec4len=%d i=%d l=%d\n",type,sec4len,i,4+sec1len+sec4len+4); */
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Assert(i <= sizeof(tmp));
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return read_the_rest(r, 4 + sec1len + sec4len + 4, tmp, i, 1);
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}
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static int read_HDF5_offset(reader* r, int length, unsigned long* v, unsigned char* tmp, int* i)
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{
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unsigned char buf[8];
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int j, k;
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int err = 0;
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if ((r->read(r->read_data, buf, length, &err) != length) || err) {
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return err;
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}
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k = *i;
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for (j = 0; j < length; j++) {
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tmp[k++] = buf[j];
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}
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*i = k;
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*v = 0;
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for (j = length - 1; j >= 0; j--) {
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*v <<= 8;
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*v |= buf[j];
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}
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return 0;
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}
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static int read_HDF5(reader* r)
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{
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/*
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* See: http://www.hdfgroup.org/HDF5/doc/H5.format.html#Superblock
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*/
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unsigned char tmp[49]; /* Should be enough */
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unsigned char buf[4];
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unsigned char version_of_superblock, size_of_offsets, size_of_lengths, consistency_flags;
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unsigned long base_address, superblock_extension_address, end_of_file_address;
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int i = 0, j;
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int err = 0;
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grib_context* c = grib_context_get_default();
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tmp[i++] = 137;
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tmp[i++] = 'H';
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tmp[i++] = 'D';
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tmp[i++] = 'F';
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if ((r->read(r->read_data, buf, 4, &err) != 4) || err) {
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return err;
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}
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|
|
if (!(buf[0] == '\r' && buf[1] == '\n' && buf[2] == 26 && buf[3] == '\n')) {
|
|
/* Invalid magic, we should not use grib_context_log without a context */
|
|
grib_context_log(c, GRIB_LOG_ERROR, "read_HDF5: invalid signature");
|
|
return GRIB_INVALID_MESSAGE;
|
|
}
|
|
|
|
for (j = 0; j < 4; j++) {
|
|
tmp[i++] = buf[j];
|
|
}
|
|
|
|
if ((r->read(r->read_data, &version_of_superblock, 1, &err) != 1) || err) {
|
|
return err;
|
|
}
|
|
|
|
tmp[i++] = version_of_superblock;
|
|
|
|
if (version_of_superblock == 2 || version_of_superblock == 3) {
|
|
if ((r->read(r->read_data, &size_of_offsets, 1, &err) != 1) || err) {
|
|
return err;
|
|
}
|
|
|
|
tmp[i++] = size_of_offsets;
|
|
|
|
if (size_of_offsets > 8) {
|
|
grib_context_log(c, GRIB_LOG_ERROR, "read_HDF5: invalid size_of_offsets: %ld, only <= 8 is supported", (long)size_of_offsets);
|
|
return GRIB_NOT_IMPLEMENTED;
|
|
}
|
|
|
|
if ((r->read(r->read_data, &size_of_lengths, 1, &err) != 1) || err) {
|
|
return err;
|
|
}
|
|
|
|
tmp[i++] = size_of_lengths;
|
|
|
|
if ((r->read(r->read_data, &consistency_flags, 1, &err) != 1) || err) {
|
|
return err;
|
|
}
|
|
|
|
tmp[i++] = consistency_flags;
|
|
|
|
err = read_HDF5_offset(r, size_of_offsets, &base_address, tmp, &i);
|
|
if (err) {
|
|
return err;
|
|
}
|
|
|
|
err = read_HDF5_offset(r, size_of_offsets, &superblock_extension_address, tmp, &i);
|
|
if (err) {
|
|
return err;
|
|
}
|
|
|
|
err = read_HDF5_offset(r, size_of_offsets, &end_of_file_address, tmp, &i);
|
|
if (err) {
|
|
return err;
|
|
}
|
|
}
|
|
else if (version_of_superblock == 0 || version_of_superblock == 1) {
|
|
char skip[4];
|
|
unsigned long file_free_space_info;
|
|
unsigned char version_of_file_free_space, version_of_root_group_symbol_table, version_number_shared_header, ch;
|
|
|
|
if ((r->read(r->read_data, &version_of_file_free_space, 1, &err) != 1) || err)
|
|
return err;
|
|
tmp[i++] = version_of_file_free_space;
|
|
|
|
if ((r->read(r->read_data, &version_of_root_group_symbol_table, 1, &err) != 1) || err)
|
|
return err;
|
|
tmp[i++] = version_of_root_group_symbol_table;
|
|
|
|
if ((r->read(r->read_data, &ch, 1, &err) != 1) || err)
|
|
return err; /* reserved */
|
|
tmp[i++] = ch;
|
|
|
|
if ((r->read(r->read_data, &version_number_shared_header, 1, &err) != 1) || err)
|
|
return err;
|
|
tmp[i++] = version_number_shared_header;
|
|
|
|
if ((r->read(r->read_data, &size_of_offsets, 1, &err) != 1) || err)
|
|
return err;
|
|
tmp[i++] = size_of_offsets;
|
|
if (size_of_offsets > 8) {
|
|
grib_context_log(c, GRIB_LOG_ERROR, "read_HDF5: invalid size_of_offsets: %ld, only <= 8 is supported", (long)size_of_offsets);
|
|
return GRIB_NOT_IMPLEMENTED;
|
|
}
|
|
|
|
if ((r->read(r->read_data, &size_of_lengths, 1, &err) != 1) || err)
|
|
return err;
|
|
tmp[i++] = size_of_lengths;
|
|
|
|
if ((r->read(r->read_data, &ch, 1, &err) != 1) || err)
|
|
return err; /*reserved*/
|
|
tmp[i++] = ch;
|
|
|
|
if ((r->read(r->read_data, &skip, 4, &err) != 4) || err)
|
|
return err; /* Group Leaf/Internal Node K: 4 bytes */
|
|
tmp[i++] = skip[0];
|
|
tmp[i++] = skip[1];
|
|
tmp[i++] = skip[2];
|
|
tmp[i++] = skip[3];
|
|
|
|
if ((r->read(r->read_data, &skip, 4, &err) != 4) || err)
|
|
return err; /* consistency_flags: 4 bytes */
|
|
tmp[i++] = skip[0];
|
|
tmp[i++] = skip[1];
|
|
tmp[i++] = skip[2];
|
|
tmp[i++] = skip[3];
|
|
|
|
if (version_of_superblock == 1) {
|
|
/* Indexed storage internal node K and reserved: only in version 1 of superblock */
|
|
if ((r->read(r->read_data, &skip, 4, &err) != 4) || err)
|
|
return err;
|
|
tmp[i++] = skip[0];
|
|
tmp[i++] = skip[1];
|
|
tmp[i++] = skip[2];
|
|
tmp[i++] = skip[3];
|
|
}
|
|
|
|
err = read_HDF5_offset(r, size_of_offsets, &base_address, tmp, &i);
|
|
if (err)
|
|
return err;
|
|
|
|
err = read_HDF5_offset(r, size_of_offsets, &file_free_space_info, tmp, &i);
|
|
if (err)
|
|
return err;
|
|
|
|
err = read_HDF5_offset(r, size_of_offsets, &end_of_file_address, tmp, &i);
|
|
if (err)
|
|
return err;
|
|
}
|
|
else {
|
|
grib_context_log(c, GRIB_LOG_ERROR, "read_HDF5: invalid version of superblock: %ld", (long)version_of_superblock);
|
|
return GRIB_NOT_IMPLEMENTED;
|
|
}
|
|
|
|
Assert(i <= sizeof(tmp));
|
|
return read_the_rest(r, end_of_file_address, tmp, i, 0);
|
|
}
|
|
|
|
static int read_WRAP(reader* r)
|
|
{
|
|
/*
|
|
* See: http://www.hdfgroup.org/HDF5/doc/H5.format.html#Superblock
|
|
*/
|
|
unsigned char tmp[36]; /* Should be enough */
|
|
unsigned char buf[8];
|
|
|
|
unsigned long long length = 0;
|
|
|
|
int i = 0, j;
|
|
int err = 0;
|
|
|
|
tmp[i++] = 'W';
|
|
tmp[i++] = 'R';
|
|
tmp[i++] = 'A';
|
|
tmp[i++] = 'P';
|
|
|
|
if ((r->read(r->read_data, buf, 8, &err) != 8) || err) {
|
|
printf("error\n");
|
|
return err;
|
|
}
|
|
|
|
for (j = 0; j < 8; j++) {
|
|
length <<= 8;
|
|
length |= buf[j];
|
|
tmp[i++] = buf[j];
|
|
}
|
|
|
|
Assert(i <= sizeof(tmp));
|
|
return read_the_rest(r, length, tmp, i, 1);
|
|
}
|
|
|
|
static int read_BUFR(reader* r)
|
|
{
|
|
/* unsigned char tmp[65536];*/ /* Should be enough */
|
|
size_t length = 0;
|
|
long edition = 0;
|
|
int err = 0;
|
|
int i = 0, j;
|
|
size_t buflen = 2048;
|
|
unsigned char* tmp = NULL;
|
|
grib_context* c = NULL;
|
|
grib_buffer* buf = NULL;
|
|
|
|
/*TODO proper context*/
|
|
c = grib_context_get_default();
|
|
tmp = (unsigned char*)malloc(buflen);
|
|
if (!tmp)
|
|
return GRIB_OUT_OF_MEMORY;
|
|
buf = grib_new_buffer(c, tmp, buflen);
|
|
buf->property = GRIB_MY_BUFFER;
|
|
r->offset = r->tell(r->read_data) - 4;
|
|
|
|
tmp[i++] = 'B';
|
|
tmp[i++] = 'U';
|
|
tmp[i++] = 'F';
|
|
tmp[i++] = 'R';
|
|
|
|
for (j = 0; j < 3; j++) {
|
|
if (r->read(r->read_data, &tmp[i], 1, &err) != 1 || err)
|
|
return err;
|
|
|
|
length <<= 8;
|
|
length |= tmp[i];
|
|
i++;
|
|
}
|
|
|
|
if (length == 0) {
|
|
grib_buffer_delete(c, buf);
|
|
return GRIB_INVALID_MESSAGE;
|
|
}
|
|
|
|
/* Edition number */
|
|
if (r->read(r->read_data, &tmp[i], 1, &err) != 1 || err)
|
|
return err;
|
|
|
|
edition = tmp[i++];
|
|
|
|
/* Assert(edition != 1); */
|
|
|
|
switch (edition) {
|
|
case 0:
|
|
case 1: {
|
|
int n;
|
|
size_t sec1len = 0;
|
|
size_t sec2len = 0;
|
|
size_t sec3len = 0;
|
|
size_t sec4len = 0;
|
|
unsigned long flags;
|
|
|
|
sec1len = length;
|
|
|
|
/* table version */
|
|
if (r->read(r->read_data, &tmp[i++], 1, &err) != 1 || err)
|
|
return err;
|
|
/* center */
|
|
if (r->read(r->read_data, &tmp[i++], 1, &err) != 1 || err)
|
|
return err;
|
|
/* update */
|
|
if (r->read(r->read_data, &tmp[i++], 1, &err) != 1 || err)
|
|
return err;
|
|
/* flags */
|
|
if (r->read(r->read_data, &tmp[i], 1, &err) != 1 || err)
|
|
return err;
|
|
flags = tmp[i++];
|
|
|
|
|
|
GROW_BUF_IF_REQUIRED(sec1len + 4 + 3);
|
|
|
|
/* Read section 1. 3 = length, 5 = table,center,process,flags */
|
|
|
|
n = sec1len - 8; /* Just a guess */
|
|
if ((r->read(r->read_data, tmp + i, n, &err) != n) || err)
|
|
return err;
|
|
|
|
i += n;
|
|
|
|
if (flags & (1 << 7)) {
|
|
/* Section 2 */
|
|
for (j = 0; j < 3; j++) {
|
|
if (r->read(r->read_data, &tmp[i], 1, &err) != 1 || err)
|
|
return err;
|
|
|
|
sec2len <<= 8;
|
|
sec2len |= tmp[i];
|
|
i++;
|
|
}
|
|
|
|
GROW_BUF_IF_REQUIRED(sec1len + sec2len + 4 + 3);
|
|
|
|
/* Read section 2 */
|
|
if ((r->read(r->read_data, tmp + i, sec2len - 3, &err) != sec2len - 3) || err)
|
|
return err;
|
|
i += sec2len - 3;
|
|
}
|
|
|
|
|
|
/* Section 3 */
|
|
for (j = 0; j < 3; j++) {
|
|
if (r->read(r->read_data, &tmp[i], 1, &err) != 1 || err)
|
|
return err;
|
|
|
|
sec3len <<= 8;
|
|
sec3len |= tmp[i];
|
|
i++;
|
|
}
|
|
|
|
GROW_BUF_IF_REQUIRED(sec1len + sec2len + sec3len + 4 + 3);
|
|
|
|
/* Read section 3 */
|
|
if ((r->read(r->read_data, tmp + i, sec3len - 3, &err) != sec3len - 3) || err)
|
|
return err;
|
|
i += sec3len - 3;
|
|
|
|
for (j = 0; j < 3; j++) {
|
|
if (r->read(r->read_data, &tmp[i], 1, &err) != 1 || err)
|
|
return err;
|
|
|
|
sec4len <<= 8;
|
|
sec4len |= tmp[i];
|
|
i++;
|
|
}
|
|
|
|
/* fprintf(stderr," sec1len=%d sec2len=%d sec3len=%d sec4len=%d\n",sec1len, sec2len,sec3len,sec4len); */
|
|
length = 4 + sec1len + sec2len + sec3len + sec4len + 4;
|
|
/* fprintf(stderr,"length = %d i = %d\n",length,i); */
|
|
} break;
|
|
case 2:
|
|
case 3:
|
|
case 4:
|
|
break;
|
|
default:
|
|
r->seek_from_start(r->read_data, r->offset + 4);
|
|
grib_buffer_delete(c, buf);
|
|
return GRIB_UNSUPPORTED_EDITION;
|
|
}
|
|
|
|
/* Assert(i <= sizeof(tmp)); */
|
|
err = read_the_rest(r, length, tmp, i, 1);
|
|
if (err)
|
|
r->seek_from_start(r->read_data, r->offset + 4);
|
|
|
|
grib_buffer_delete(c, buf);
|
|
|
|
return err;
|
|
}
|
|
|
|
static int _read_any(reader* r, int grib_ok, int bufr_ok, int hdf5_ok, int wrap_ok)
|
|
{
|
|
unsigned char c;
|
|
int err = 0;
|
|
unsigned long magic = 0;
|
|
|
|
while (r->read(r->read_data, &c, 1, &err) == 1 && err == 0) {
|
|
magic <<= 8;
|
|
magic |= c;
|
|
|
|
switch (magic & 0xffffffff) {
|
|
case GRIB:
|
|
if (grib_ok) {
|
|
err = read_GRIB(r);
|
|
return err == GRIB_END_OF_FILE ? GRIB_PREMATURE_END_OF_FILE : err; /* Premature EOF */
|
|
}
|
|
break;
|
|
|
|
case BUFR:
|
|
if (bufr_ok) {
|
|
err = read_BUFR(r);
|
|
return err == GRIB_END_OF_FILE ? GRIB_PREMATURE_END_OF_FILE : err; /* Premature EOF */
|
|
}
|
|
break;
|
|
|
|
case HDF5:
|
|
if (hdf5_ok) {
|
|
err = read_HDF5(r);
|
|
return err == GRIB_END_OF_FILE ? GRIB_PREMATURE_END_OF_FILE : err; /* Premature EOF */
|
|
}
|
|
break;
|
|
|
|
case WRAP:
|
|
if (wrap_ok) {
|
|
err = read_WRAP(r);
|
|
return err == GRIB_END_OF_FILE ? GRIB_PREMATURE_END_OF_FILE : err; /* Premature EOF */
|
|
}
|
|
break;
|
|
|
|
case BUDG:
|
|
if (grib_ok) {
|
|
err = read_PSEUDO(r, "BUDG");
|
|
return err == GRIB_END_OF_FILE ? GRIB_PREMATURE_END_OF_FILE : err; /* Premature EOF */
|
|
}
|
|
break;
|
|
case DIAG:
|
|
if (grib_ok) {
|
|
err = read_PSEUDO(r, "DIAG");
|
|
return err == GRIB_END_OF_FILE ? GRIB_PREMATURE_END_OF_FILE : err; /* Premature EOF */
|
|
}
|
|
break;
|
|
case TIDE:
|
|
if (grib_ok) {
|
|
err = read_PSEUDO(r, "TIDE");
|
|
return err == GRIB_END_OF_FILE ? GRIB_PREMATURE_END_OF_FILE : err; /* Premature EOF */
|
|
}
|
|
break;
|
|
}
|
|
}
|
|
|
|
return err;
|
|
}
|
|
|
|
static int read_any(reader* r, int grib_ok, int bufr_ok, int hdf5_ok, int wrap_ok)
|
|
{
|
|
int result = 0;
|
|
|
|
#ifndef ECCODES_EACH_THREAD_OWN_FILE
|
|
/* If several threads can open the same file, then we need the locks
|
|
* so each thread gets its own message. Otherwise if threads are passed
|
|
* different files, then the lock is not needed
|
|
*/
|
|
GRIB_MUTEX_INIT_ONCE(&once, &init);
|
|
GRIB_MUTEX_LOCK(&mutex1);
|
|
#endif
|
|
|
|
result = _read_any(r, grib_ok, bufr_ok, hdf5_ok, wrap_ok);
|
|
|
|
#ifndef ECCODES_EACH_THREAD_OWN_FILE
|
|
GRIB_MUTEX_UNLOCK(&mutex1);
|
|
#endif
|
|
return result;
|
|
}
|
|
|
|
static int read_any_gts(reader* r)
|
|
{
|
|
unsigned char c;
|
|
int err = 0;
|
|
unsigned char* buffer = NULL;
|
|
unsigned long magic = 0;
|
|
unsigned long start = 0x010d0d0a; /* SOH CR CR LF */
|
|
unsigned long theEnd = 0x0d0d0a03; /* CR CR LF ETX */
|
|
unsigned char tmp[1024] = {0,}; /* See ECC-735 */
|
|
size_t message_size = 0;
|
|
size_t already_read = 0;
|
|
int i = 0;
|
|
|
|
while (r->read(r->read_data, &c, 1, &err) == 1 && err == 0) {
|
|
magic <<= 8;
|
|
magic |= c;
|
|
magic &= 0xffffffff;
|
|
|
|
if (magic == start) {
|
|
tmp[i++] = 0x01;
|
|
tmp[i++] = 0x0d;
|
|
tmp[i++] = 0x0d;
|
|
tmp[i++] = 0x0a;
|
|
|
|
r->offset = r->tell(r->read_data) - 4;
|
|
|
|
if (r->read(r->read_data, &tmp[i], 6, &err) != 6 || err)
|
|
return err == GRIB_END_OF_FILE ? GRIB_PREMATURE_END_OF_FILE : err; /* Premature EOF */
|
|
|
|
if (tmp[7] != 0x0d || tmp[8] != 0x0d || tmp[9] != 0x0a) {
|
|
r->seek(r->read_data, -6);
|
|
continue;
|
|
}
|
|
magic = 0;
|
|
already_read = 10;
|
|
message_size = already_read;
|
|
while (r->read(r->read_data, &c, 1, &err) == 1 && err == 0) {
|
|
message_size++;
|
|
magic <<= 8;
|
|
magic |= c;
|
|
magic &= 0xffffffff;
|
|
if (magic == theEnd) {
|
|
r->seek(r->read_data, already_read - message_size);
|
|
buffer = (unsigned char*)r->alloc(r->alloc_data, &message_size, &err);
|
|
if (!buffer)
|
|
return GRIB_OUT_OF_MEMORY;
|
|
if (err)
|
|
return err;
|
|
memcpy(buffer, tmp, already_read);
|
|
r->read(r->read_data, buffer + already_read, message_size - already_read, &err);
|
|
r->message_size = message_size;
|
|
return err;
|
|
}
|
|
}
|
|
}
|
|
}
|
|
|
|
return err;
|
|
}
|
|
|
|
static int read_any_taf(reader* r)
|
|
{
|
|
unsigned char c;
|
|
int err = 0;
|
|
unsigned char* buffer = NULL;
|
|
unsigned long magic = 0;
|
|
unsigned long start = 0x54414620;
|
|
unsigned char tmp[1000] = {0,}; /* Should be enough */
|
|
size_t message_size = 0;
|
|
size_t already_read = 0;
|
|
int i = 0;
|
|
|
|
while (r->read(r->read_data, &c, 1, &err) == 1 && err == 0) {
|
|
magic <<= 8;
|
|
magic |= c;
|
|
magic &= 0xffffffff;
|
|
|
|
if (magic == start) {
|
|
tmp[i++] = 0x54;
|
|
tmp[i++] = 0x41;
|
|
tmp[i++] = 0x46;
|
|
tmp[i++] = 0x20;
|
|
|
|
r->offset = r->tell(r->read_data) - 4;
|
|
|
|
already_read = 4;
|
|
message_size = already_read;
|
|
while (r->read(r->read_data, &c, 1, &err) == 1 && err == 0) {
|
|
message_size++;
|
|
if (c == '=') {
|
|
r->seek(r->read_data, already_read - message_size);
|
|
buffer = (unsigned char*)r->alloc(r->alloc_data, &message_size, &err);
|
|
if (!buffer)
|
|
return GRIB_OUT_OF_MEMORY;
|
|
if (err)
|
|
return err;
|
|
memcpy(buffer, tmp, already_read);
|
|
r->read(r->read_data, buffer + already_read, message_size - already_read, &err);
|
|
r->message_size = message_size;
|
|
return err;
|
|
}
|
|
}
|
|
}
|
|
}
|
|
|
|
return err;
|
|
}
|
|
|
|
static int read_any_metar(reader* r)
|
|
{
|
|
unsigned char c;
|
|
int err = 0;
|
|
unsigned char* buffer = NULL;
|
|
unsigned long magic = 0;
|
|
unsigned long start = 0x4d455441;
|
|
unsigned char tmp[32] = {0,}; /* Should be enough */
|
|
size_t message_size = 0;
|
|
size_t already_read = 0;
|
|
int i = 0;
|
|
|
|
while (r->read(r->read_data, &c, 1, &err) == 1 && err == 0) {
|
|
magic <<= 8;
|
|
magic |= c;
|
|
magic &= 0xffffffff;
|
|
|
|
if (magic == start) {
|
|
if (r->read(r->read_data, &c, 1, &err) != 1 || err != 0)
|
|
break;
|
|
if (c == 'R') {
|
|
tmp[i++] = 0x4d;
|
|
tmp[i++] = 0x45;
|
|
tmp[i++] = 0x54;
|
|
tmp[i++] = 0x41;
|
|
tmp[i++] = 'R';
|
|
|
|
r->offset = r->tell(r->read_data) - 4;
|
|
|
|
already_read = 5;
|
|
message_size = already_read;
|
|
while (r->read(r->read_data, &c, 1, &err) == 1 && err == 0) {
|
|
message_size++;
|
|
if (c == '=') {
|
|
r->seek(r->read_data, already_read - message_size);
|
|
buffer = (unsigned char*)r->alloc(r->alloc_data, &message_size, &err);
|
|
if (!buffer)
|
|
return GRIB_OUT_OF_MEMORY;
|
|
if (err)
|
|
return err;
|
|
memcpy(buffer, tmp, already_read);
|
|
r->read(r->read_data, buffer + already_read, message_size - already_read, &err);
|
|
r->message_size = message_size;
|
|
return err;
|
|
}
|
|
}
|
|
}
|
|
}
|
|
}
|
|
|
|
return err;
|
|
}
|
|
|
|
off_t stdio_tell(void* data)
|
|
{
|
|
FILE* f = (FILE*)data;
|
|
return ftello(f);
|
|
}
|
|
|
|
int stdio_seek(void* data, off_t len)
|
|
{
|
|
FILE* f = (FILE*)data;
|
|
int err = 0;
|
|
if (fseeko(f, len, SEEK_CUR))
|
|
err = GRIB_IO_PROBLEM;
|
|
return err;
|
|
}
|
|
|
|
int stdio_seek_from_start(void* data, off_t len)
|
|
{
|
|
FILE* f = (FILE*)data;
|
|
int err = 0;
|
|
if (fseeko(f, len, SEEK_SET))
|
|
err = GRIB_IO_PROBLEM;
|
|
return err;
|
|
}
|
|
|
|
size_t stdio_read(void* data, void* buf, size_t len, int* err)
|
|
{
|
|
FILE* f = (FILE*)data;
|
|
size_t n;
|
|
/* char iobuf[1024*1024]; */
|
|
|
|
if (len == 0)
|
|
return 0;
|
|
|
|
/* setvbuf(f,iobuf,_IOFBF,sizeof(iobuf)); */
|
|
n = fread(buf, 1, len, f);
|
|
/* fprintf(stderr,"read %d = %x %c\n",1,(int)buf[0],buf[0]); */
|
|
if (n != len) {
|
|
/* fprintf(stderr,"Failed to read %d, only got %d\n",len,n); */
|
|
*err = GRIB_IO_PROBLEM;
|
|
if (feof(f))
|
|
*err = GRIB_END_OF_FILE;
|
|
if (ferror(f))
|
|
*err = GRIB_IO_PROBLEM;
|
|
}
|
|
return n;
|
|
}
|
|
|
|
/*================== */
|
|
typedef struct user_buffer_t
|
|
{
|
|
void* user_buffer;
|
|
size_t buffer_size;
|
|
} user_buffer_t;
|
|
|
|
static void* user_provider_buffer(void* data, size_t* length, int* err)
|
|
{
|
|
user_buffer_t* u = (user_buffer_t*)data;
|
|
*length = u->buffer_size;
|
|
return u->user_buffer;
|
|
}
|
|
|
|
static int _wmo_read_any_from_file(FILE* f, void* buffer, size_t* len, int grib_ok, int bufr_ok, int hdf5_ok, int wrap_ok)
|
|
{
|
|
int err;
|
|
user_buffer_t u;
|
|
reader r;
|
|
|
|
u.user_buffer = buffer;
|
|
u.buffer_size = *len;
|
|
|
|
r.message_size = 0;
|
|
r.read_data = f;
|
|
r.read = &stdio_read;
|
|
r.seek = &stdio_seek;
|
|
r.seek_from_start = &stdio_seek_from_start;
|
|
r.tell = &stdio_tell;
|
|
r.alloc_data = &u;
|
|
r.alloc = &user_provider_buffer;
|
|
r.headers_only = 0;
|
|
|
|
err = read_any(&r, grib_ok, bufr_ok, hdf5_ok, wrap_ok);
|
|
*len = r.message_size;
|
|
|
|
return err;
|
|
}
|
|
|
|
int wmo_read_any_from_file(FILE* f, void* buffer, size_t* len)
|
|
{
|
|
return _wmo_read_any_from_file(f, buffer, len, 1, 1, 1, 1);
|
|
}
|
|
|
|
int wmo_read_grib_from_file(FILE* f, void* buffer, size_t* len)
|
|
{
|
|
return _wmo_read_any_from_file(f, buffer, len, 1, 0, 0, 0);
|
|
}
|
|
|
|
int wmo_read_bufr_from_file(FILE* f, void* buffer, size_t* len)
|
|
{
|
|
return _wmo_read_any_from_file(f, buffer, len, 0, 1, 0, 0);
|
|
}
|
|
|
|
int wmo_read_gts_from_file(FILE* f, void* buffer, size_t* len)
|
|
{
|
|
int err;
|
|
user_buffer_t u;
|
|
reader r;
|
|
|
|
u.user_buffer = buffer;
|
|
u.buffer_size = *len;
|
|
|
|
r.message_size = 0;
|
|
r.read_data = f;
|
|
r.read = &stdio_read;
|
|
r.seek = &stdio_seek;
|
|
r.seek_from_start = &stdio_seek_from_start;
|
|
r.tell = &stdio_tell;
|
|
r.alloc_data = &u;
|
|
r.alloc = &user_provider_buffer;
|
|
r.headers_only = 0;
|
|
|
|
err = read_any_gts(&r);
|
|
*len = r.message_size;
|
|
|
|
return err;
|
|
}
|
|
|
|
int wmo_read_taf_from_file(FILE* f, void* buffer, size_t* len)
|
|
{
|
|
int err;
|
|
user_buffer_t u;
|
|
reader r;
|
|
|
|
u.user_buffer = buffer;
|
|
u.buffer_size = *len;
|
|
|
|
r.read_data = f;
|
|
r.read = &stdio_read;
|
|
r.seek = &stdio_seek;
|
|
r.seek_from_start = &stdio_seek_from_start;
|
|
r.tell = &stdio_tell;
|
|
r.alloc_data = &u;
|
|
r.alloc = &user_provider_buffer;
|
|
r.headers_only = 0;
|
|
|
|
err = read_any_taf(&r);
|
|
*len = r.message_size;
|
|
|
|
return err;
|
|
}
|
|
|
|
int wmo_read_metar_from_file(FILE* f, void* buffer, size_t* len)
|
|
{
|
|
int err;
|
|
user_buffer_t u;
|
|
reader r;
|
|
|
|
u.user_buffer = buffer;
|
|
u.buffer_size = *len;
|
|
|
|
r.read_data = f;
|
|
r.read = &stdio_read;
|
|
r.seek = &stdio_seek;
|
|
r.seek_from_start = &stdio_seek_from_start;
|
|
r.tell = &stdio_tell;
|
|
r.alloc_data = &u;
|
|
r.alloc = &user_provider_buffer;
|
|
r.headers_only = 0;
|
|
|
|
err = read_any_metar(&r);
|
|
*len = r.message_size;
|
|
|
|
return err;
|
|
}
|
|
|
|
/*================== */
|
|
|
|
typedef struct stream_struct
|
|
{
|
|
void* stream_data;
|
|
long (*stream_proc)(void*, void* buffer, long len);
|
|
|
|
} stream_struct;
|
|
|
|
static off_t stream_tell(void* data)
|
|
{
|
|
return 0;
|
|
}
|
|
|
|
static int stream_seek(void* data, off_t len)
|
|
{
|
|
return 0;
|
|
}
|
|
static size_t stream_read(void* data, void* buffer, size_t len, int* err)
|
|
{
|
|
stream_struct* s = (stream_struct*)data;
|
|
long n = len;
|
|
|
|
if (n != len) {
|
|
/* size_t cannot be coded into long */
|
|
*err = GRIB_INTERNAL_ERROR;
|
|
return -1;
|
|
}
|
|
|
|
n = s->stream_proc(s->stream_data, buffer, len);
|
|
if (n != len) {
|
|
*err = GRIB_IO_PROBLEM;
|
|
if (n == -1)
|
|
*err = GRIB_END_OF_FILE;
|
|
}
|
|
return n;
|
|
}
|
|
|
|
/*================== */
|
|
|
|
|
|
static void* allocate_buffer(void* data, size_t* length, int* err)
|
|
{
|
|
alloc_buffer* u = (alloc_buffer*)data;
|
|
u->buffer = malloc(*length);
|
|
u->size = *length;
|
|
if (u->buffer == NULL)
|
|
*err = GRIB_OUT_OF_MEMORY; /* Cannot allocate buffer */
|
|
return u->buffer;
|
|
}
|
|
|
|
int wmo_read_any_from_stream(void* stream_data, long (*stream_proc)(void*, void* buffer, long len), void* buffer, size_t* len)
|
|
{
|
|
int err;
|
|
stream_struct s;
|
|
user_buffer_t u;
|
|
reader r;
|
|
|
|
s.stream_data = stream_data;
|
|
s.stream_proc = stream_proc;
|
|
|
|
u.user_buffer = buffer;
|
|
u.buffer_size = *len;
|
|
|
|
r.message_size = 0;
|
|
r.offset = 0;
|
|
r.read_data = &s;
|
|
r.read = &stream_read;
|
|
r.seek = &stream_seek;
|
|
r.seek_from_start = &stream_seek;
|
|
r.tell = &stream_tell;
|
|
r.alloc_data = &u;
|
|
r.alloc = &user_provider_buffer;
|
|
r.headers_only = 0;
|
|
|
|
err = read_any(&r, 1, 1, 1, 1);
|
|
*len = r.message_size;
|
|
|
|
return err;
|
|
}
|
|
|
|
/* This function allocates memory for the result so the user is responsible for freeing it */
|
|
void* wmo_read_any_from_stream_malloc(void* stream_data, long (*stream_proc)(void*, void* buffer, long len), size_t* size, int* err)
|
|
{
|
|
alloc_buffer u;
|
|
stream_struct s;
|
|
reader r;
|
|
|
|
u.buffer = NULL;
|
|
|
|
s.stream_data = stream_data;
|
|
s.stream_proc = stream_proc;
|
|
|
|
r.message_size = 0;
|
|
r.offset = 0;
|
|
r.read_data = &s;
|
|
r.read = &stream_read;
|
|
r.seek = &stream_seek;
|
|
r.seek_from_start = &stream_seek;
|
|
r.tell = &stream_tell;
|
|
r.alloc_data = &u;
|
|
r.alloc = &allocate_buffer;
|
|
r.headers_only = 0;
|
|
|
|
*err = read_any(&r, 1, 1, 1, 1);
|
|
*size = r.message_size;
|
|
|
|
return u.buffer;
|
|
}
|
|
|
|
/*================== */
|
|
|
|
/* This function allocates memory for the result so the user is responsible for freeing it */
|
|
void* wmo_read_gts_from_file_malloc(FILE* f, int headers_only, size_t* size, off_t* offset, int* err)
|
|
{
|
|
alloc_buffer u;
|
|
reader r;
|
|
|
|
u.buffer = NULL;
|
|
r.offset = 0;
|
|
|
|
r.message_size = 0;
|
|
r.read_data = f;
|
|
r.read = &stdio_read;
|
|
r.seek = &stdio_seek;
|
|
r.seek_from_start = &stdio_seek_from_start;
|
|
r.tell = &stdio_tell;
|
|
r.alloc_data = &u;
|
|
r.alloc = &allocate_buffer;
|
|
r.headers_only = headers_only;
|
|
|
|
*err = read_any_gts(&r);
|
|
*size = r.message_size;
|
|
*offset = r.offset;
|
|
|
|
return u.buffer;
|
|
}
|
|
|
|
/* This function allocates memory for the result so the user is responsible for freeing it */
|
|
void* wmo_read_taf_from_file_malloc(FILE* f, int headers_only, size_t* size, off_t* offset, int* err)
|
|
{
|
|
alloc_buffer u;
|
|
reader r;
|
|
|
|
u.buffer = NULL;
|
|
|
|
r.offset = 0;
|
|
r.message_size = 0;
|
|
r.read_data = f;
|
|
r.read = &stdio_read;
|
|
r.seek = &stdio_seek;
|
|
r.seek_from_start = &stdio_seek_from_start;
|
|
r.tell = &stdio_tell;
|
|
r.alloc_data = &u;
|
|
r.alloc = &allocate_buffer;
|
|
r.headers_only = headers_only;
|
|
|
|
*err = read_any_taf(&r);
|
|
*size = r.message_size;
|
|
*offset = r.offset;
|
|
|
|
return u.buffer;
|
|
}
|
|
|
|
/* This function allocates memory for the result so the user is responsible for freeing it */
|
|
void* wmo_read_metar_from_file_malloc(FILE* f, int headers_only, size_t* size, off_t* offset, int* err)
|
|
{
|
|
alloc_buffer u;
|
|
reader r;
|
|
|
|
u.buffer = NULL;
|
|
|
|
r.message_size = 0;
|
|
r.read_data = f;
|
|
r.offset = 0;
|
|
r.read = &stdio_read;
|
|
r.seek = &stdio_seek;
|
|
r.seek_from_start = &stdio_seek_from_start;
|
|
r.tell = &stdio_tell;
|
|
r.alloc_data = &u;
|
|
r.alloc = &allocate_buffer;
|
|
r.headers_only = headers_only;
|
|
|
|
*err = read_any_metar(&r);
|
|
*size = r.message_size;
|
|
*offset = r.offset;
|
|
|
|
return u.buffer;
|
|
}
|
|
|
|
/* This function allocates memory for the result so the user is responsible for freeing it */
|
|
static void* _wmo_read_any_from_file_malloc(FILE* f, int* err, size_t* size, off_t* offset,
|
|
int grib_ok, int bufr_ok, int hdf5_ok, int wrap_ok, int headers_only)
|
|
{
|
|
alloc_buffer u;
|
|
reader r;
|
|
|
|
u.buffer = NULL;
|
|
u.size = 0;
|
|
|
|
r.message_size = 0;
|
|
r.read_data = f;
|
|
r.read = &stdio_read;
|
|
r.seek = &stdio_seek;
|
|
r.seek_from_start = &stdio_seek_from_start;
|
|
r.tell = &stdio_tell;
|
|
r.alloc_data = &u;
|
|
r.alloc = &allocate_buffer;
|
|
r.headers_only = headers_only;
|
|
r.offset = 0;
|
|
|
|
*err = read_any(&r, grib_ok, bufr_ok, hdf5_ok, wrap_ok);
|
|
|
|
*size = r.message_size;
|
|
*offset = r.offset;
|
|
|
|
return u.buffer;
|
|
}
|
|
|
|
/* This function allocates memory for the result so the user is responsible for freeing it */
|
|
void* wmo_read_any_from_file_malloc(FILE* f, int headers_only, size_t* size, off_t* offset, int* err)
|
|
{
|
|
return _wmo_read_any_from_file_malloc(f, err, size, offset, 1, 1, 1, 1, headers_only);
|
|
}
|
|
/* This function allocates memory for the result so the user is responsible for freeing it */
|
|
void* wmo_read_grib_from_file_malloc(FILE* f, int headers_only, size_t* size, off_t* offset, int* err)
|
|
{
|
|
return _wmo_read_any_from_file_malloc(f, err, size, offset, 1, 0, 0, 0, headers_only);
|
|
}
|
|
/* This function allocates memory for the result so the user is responsible for freeing it */
|
|
void* wmo_read_bufr_from_file_malloc(FILE* f, int headers_only, size_t* size, off_t* offset, int* err)
|
|
{
|
|
return _wmo_read_any_from_file_malloc(f, err, size, offset, 0, 1, 0, 0, headers_only);
|
|
}
|
|
|
|
/* ======================================= */
|
|
|
|
typedef struct context_alloc_buffer
|
|
{
|
|
grib_context* ctx;
|
|
void* buffer;
|
|
size_t length;
|
|
} context_alloc_buffer;
|
|
|
|
static void* context_allocate_buffer(void* data, size_t* length, int* err)
|
|
{
|
|
context_alloc_buffer* u = (context_alloc_buffer*)data;
|
|
u->buffer = grib_context_malloc(u->ctx, *length);
|
|
u->length = *length;
|
|
|
|
if (u->buffer == NULL)
|
|
*err = GRIB_OUT_OF_MEMORY; /* Cannot allocate buffer */
|
|
return u->buffer;
|
|
}
|
|
|
|
int grib_read_any_headers_only_from_file(grib_context* ctx, FILE* f, void* buffer, size_t* len)
|
|
{
|
|
int err;
|
|
user_buffer_t u;
|
|
reader r;
|
|
|
|
u.user_buffer = buffer;
|
|
u.buffer_size = *len;
|
|
|
|
r.message_size = 0;
|
|
r.read_data = f;
|
|
r.read = &stdio_read;
|
|
r.seek = &stdio_seek;
|
|
r.seek_from_start = &stdio_seek_from_start;
|
|
r.tell = &stdio_tell;
|
|
r.alloc_data = &u;
|
|
r.alloc = &user_provider_buffer;
|
|
r.headers_only = 1;
|
|
|
|
err = read_any(&r, 1, ECCODES_READS_BUFR, ECCODES_READS_HDF5, ECCODES_READS_WRAP);
|
|
|
|
*len = r.message_size;
|
|
|
|
return err;
|
|
}
|
|
|
|
int grib_read_any_from_file(grib_context* ctx, FILE* f, void* buffer, size_t* len)
|
|
{
|
|
int err;
|
|
user_buffer_t u;
|
|
reader r;
|
|
off_t offset;
|
|
|
|
u.user_buffer = buffer;
|
|
u.buffer_size = *len;
|
|
|
|
r.message_size = 0;
|
|
r.read_data = f;
|
|
r.read = &stdio_read;
|
|
r.seek = &stdio_seek;
|
|
r.seek_from_start = &stdio_seek_from_start;
|
|
r.tell = &stdio_tell;
|
|
r.alloc_data = &u;
|
|
r.alloc = &user_provider_buffer;
|
|
r.headers_only = 0;
|
|
|
|
offset = ftello(f);
|
|
|
|
err = read_any(&r, 1, ECCODES_READS_BUFR, ECCODES_READS_HDF5, ECCODES_READS_WRAP);
|
|
|
|
if (err == GRIB_BUFFER_TOO_SMALL) {
|
|
if (fseeko(f, offset, SEEK_SET))
|
|
err = GRIB_IO_PROBLEM;
|
|
}
|
|
|
|
*len = r.message_size;
|
|
|
|
return err;
|
|
}
|
|
|
|
/* ======================================= */
|
|
typedef struct memory_read_data
|
|
{
|
|
unsigned char* data;
|
|
size_t data_len;
|
|
} memory_read_data;
|
|
|
|
static off_t memory_tell(void* data)
|
|
{
|
|
return 0;
|
|
}
|
|
|
|
static int memory_seek(void* data, off_t len)
|
|
{
|
|
return 0;
|
|
}
|
|
|
|
static size_t memory_read(void* data, void* buf, size_t len, int* err)
|
|
{
|
|
memory_read_data* m = (memory_read_data*)data;
|
|
|
|
if (len == 0) {
|
|
*err = GRIB_END_OF_FILE;
|
|
return 0;
|
|
}
|
|
else {
|
|
size_t l = len > m->data_len ? m->data_len : len;
|
|
memcpy(buf, m->data, l);
|
|
m->data_len -= l;
|
|
m->data += l;
|
|
return l;
|
|
}
|
|
}
|
|
|
|
int grib_read_any_from_memory_alloc(grib_context* ctx, unsigned char** data, size_t* data_length, void** buffer, size_t* length)
|
|
{
|
|
int err;
|
|
memory_read_data m;
|
|
context_alloc_buffer u;
|
|
reader r;
|
|
|
|
m.data = *data;
|
|
m.data_len = *data_length;
|
|
|
|
u.buffer = NULL;
|
|
u.length = 0;
|
|
u.ctx = ctx ? ctx : grib_context_get_default();
|
|
|
|
r.message_size = 0;
|
|
r.read_data = &m;
|
|
r.read = &memory_read;
|
|
r.seek = &memory_seek;
|
|
r.seek_from_start = &memory_seek;
|
|
r.tell = &memory_tell;
|
|
r.alloc_data = &u;
|
|
r.alloc = &context_allocate_buffer;
|
|
r.headers_only = 0;
|
|
|
|
err = read_any(&r, 1, ECCODES_READS_BUFR, ECCODES_READS_HDF5, ECCODES_READS_WRAP);
|
|
*buffer = u.buffer;
|
|
*length = u.length;
|
|
|
|
*data_length = m.data_len;
|
|
*data = m.data;
|
|
|
|
return err;
|
|
}
|
|
|
|
int grib_read_any_from_memory(grib_context* ctx, unsigned char** data, size_t* data_length, void* buffer, size_t* len)
|
|
{
|
|
int err;
|
|
memory_read_data m;
|
|
user_buffer_t u;
|
|
reader r;
|
|
|
|
m.data = *data;
|
|
m.data_len = *data_length;
|
|
|
|
u.user_buffer = buffer;
|
|
u.buffer_size = *len;
|
|
|
|
r.message_size = 0;
|
|
r.read_data = &m;
|
|
r.read = &memory_read;
|
|
r.seek = &memory_seek;
|
|
r.seek_from_start = &memory_seek;
|
|
r.tell = &memory_tell;
|
|
r.alloc_data = &u;
|
|
r.alloc = &user_provider_buffer;
|
|
r.headers_only = 0;
|
|
|
|
err = read_any(&r, 1, ECCODES_READS_BUFR, ECCODES_READS_HDF5, ECCODES_READS_WRAP);
|
|
*len = r.message_size;
|
|
|
|
*data_length = m.data_len;
|
|
*data = m.data;
|
|
|
|
return err;
|
|
}
|
|
|
|
int grib_count_in_file(grib_context* c, FILE* f, int* n)
|
|
{
|
|
int err = 0;
|
|
*n = 0;
|
|
if (!c)
|
|
c = grib_context_get_default();
|
|
|
|
if (c->multi_support_on) {
|
|
/* GRIB-395 */
|
|
grib_handle* h = NULL;
|
|
while ((h = grib_handle_new_from_file(c, f, &err)) != NULL) {
|
|
grib_handle_delete(h);
|
|
(*n)++;
|
|
}
|
|
}
|
|
else {
|
|
void* mesg = NULL;
|
|
size_t size = 0;
|
|
off_t offset = 0;
|
|
while ((mesg = wmo_read_any_from_file_malloc(f, 0, &size, &offset, &err)) != NULL && err == GRIB_SUCCESS) {
|
|
grib_context_free(c, mesg);
|
|
(*n)++;
|
|
}
|
|
}
|
|
|
|
rewind(f);
|
|
|
|
return err == GRIB_END_OF_FILE ? 0 : err;
|
|
}
|
|
|
|
int grib_count_in_filename(grib_context* c, const char* filename, int* n)
|
|
{
|
|
int err = 0;
|
|
FILE* fp = NULL;
|
|
if (!c)
|
|
c = grib_context_get_default();
|
|
fp = fopen(filename, "rb");
|
|
if (!fp) {
|
|
grib_context_log(c, GRIB_LOG_ERROR, "grib_count_in_filename: Unable to read file \"%s\"", filename);
|
|
perror(filename);
|
|
return GRIB_IO_PROBLEM;
|
|
}
|
|
err = grib_count_in_file(c, fp, n);
|
|
fclose(fp);
|
|
return err;
|
|
}
|
|
|
|
typedef void* (*decoder_proc)(FILE* f, int headers_only, size_t* size, off_t* offset, int* err);
|
|
|
|
static decoder_proc get_reader_for_product(ProductKind product)
|
|
{
|
|
decoder_proc decoder = NULL;
|
|
if (product == PRODUCT_GRIB) decoder = &wmo_read_grib_from_file_malloc;
|
|
else if (product == PRODUCT_BUFR) decoder = &wmo_read_bufr_from_file_malloc;
|
|
else if (product == PRODUCT_GTS) decoder = &wmo_read_gts_from_file_malloc;
|
|
else if (product == PRODUCT_ANY) decoder = &wmo_read_any_from_file_malloc;
|
|
return decoder;
|
|
}
|
|
|
|
static int count_product_in_file(grib_context* c, FILE* f, ProductKind product, int* count)
|
|
{
|
|
int err = 0;
|
|
decoder_proc decoder = NULL;
|
|
|
|
*count = 0;
|
|
if (!c) c = grib_context_get_default();
|
|
decoder = get_reader_for_product(product);
|
|
|
|
if (!decoder) {
|
|
grib_context_log(c, GRIB_LOG_ERROR, "count_product_in_file: not supported for given product");
|
|
return GRIB_INVALID_ARGUMENT;
|
|
}
|
|
|
|
if (c->multi_support_on && product == PRODUCT_GRIB) {
|
|
grib_context_log(c, GRIB_LOG_ERROR, "count_product_in_file: Multi-field GRIBs not supported");
|
|
err = GRIB_NOT_IMPLEMENTED;
|
|
}
|
|
else {
|
|
void* mesg = NULL;
|
|
size_t size = 0;
|
|
off_t offset = 0;
|
|
while ((mesg = decoder(f, 0, &size, &offset, &err)) != NULL && err == GRIB_SUCCESS) {
|
|
grib_context_free(c, mesg);
|
|
(*count)++;
|
|
}
|
|
rewind(f);
|
|
}
|
|
|
|
return err == GRIB_END_OF_FILE ? 0 : err;
|
|
}
|
|
|
|
int codes_extract_offsets_malloc(grib_context* c, const char* filename, ProductKind product, off_t** offsets, int* length, int strict_mode)
|
|
{
|
|
int err = 0;
|
|
void* mesg = NULL;
|
|
size_t size = 0;
|
|
off_t offset = 0;
|
|
int num_messages = 0, i = 0;
|
|
decoder_proc decoder = NULL;
|
|
FILE* f = NULL;
|
|
|
|
decoder = get_reader_for_product(product);
|
|
if (!decoder) {
|
|
grib_context_log(c, GRIB_LOG_ERROR, "codes_extract_offsets_malloc: not supported for given product");
|
|
return GRIB_INVALID_ARGUMENT;
|
|
}
|
|
if (!c) c = grib_context_get_default();
|
|
f = fopen(filename, "rb");
|
|
if (!f) {
|
|
grib_context_log(c, GRIB_LOG_ERROR, "codes_extract_offsets_malloc: Unable to read file \"%s\"", filename);
|
|
perror(filename);
|
|
return GRIB_IO_PROBLEM;
|
|
}
|
|
|
|
err = count_product_in_file(c, f, product, &num_messages);
|
|
if (err) {
|
|
grib_context_log(c, GRIB_LOG_ERROR, "codes_extract_offsets_malloc: Unable to count messages");
|
|
fclose(f);
|
|
return err;
|
|
}
|
|
*length = num_messages;
|
|
if (num_messages == 0) {
|
|
grib_context_log(c, GRIB_LOG_ERROR, "codes_extract_offsets_malloc: No messages in file");
|
|
fclose(f);
|
|
return GRIB_INVALID_MESSAGE;
|
|
}
|
|
*offsets = (off_t*)calloc(num_messages, sizeof(off_t));
|
|
if (!*offsets) {
|
|
fclose(f);
|
|
return GRIB_OUT_OF_MEMORY;
|
|
}
|
|
|
|
i = 0;
|
|
while (err != GRIB_END_OF_FILE) {
|
|
if (i >= num_messages)
|
|
break;
|
|
|
|
mesg = decoder(f, 0, &size, &offset, &err);
|
|
if (mesg != NULL && err == 0) {
|
|
(*offsets)[i] = offset;
|
|
grib_context_free(c, mesg);
|
|
}
|
|
if (mesg && err) {
|
|
if (strict_mode) {
|
|
grib_context_free(c, mesg);
|
|
fclose(f);
|
|
return GRIB_DECODING_ERROR;
|
|
}
|
|
}
|
|
if (!mesg) {
|
|
if (err != GRIB_END_OF_FILE && err != GRIB_PREMATURE_END_OF_FILE) {
|
|
/* An error occurred */
|
|
grib_context_log(c, GRIB_LOG_ERROR, "codes_extract_offsets_malloc: Unable to read message");
|
|
if (strict_mode) {
|
|
fclose(f);
|
|
return GRIB_DECODING_ERROR;
|
|
}
|
|
}
|
|
}
|
|
++i;
|
|
}
|
|
|
|
fclose(f);
|
|
return err;
|
|
}
|