Merge branch 'develop' into feature/ECC-1270-marsLevtype

This commit is contained in:
Shahram Najm 2021-09-03 17:12:49 +01:00
commit 9baed56332
44 changed files with 650 additions and 775 deletions

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@ -2,7 +2,7 @@
# general configuration #
#---------------------------------#
version: 2.23.0-{build}-{branch}
version: 2.24.0-{build}-{branch}
branches:
only:

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@ -21,7 +21,7 @@ cmake_minimum_required( VERSION 3.12 FATAL_ERROR )
find_package( ecbuild 3.4 REQUIRED HINTS ${CMAKE_CURRENT_SOURCE_DIR} ${CMAKE_CURRENT_SOURCE_DIR}/../ecbuild)
# Initialise project
project( eccodes VERSION 2.23.0 LANGUAGES C )
project( eccodes VERSION 2.24.0 LANGUAGES C )
###############################################################################
# system checks needed for eccodes_config.h and some options like MEMFS

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@ -27,7 +27,6 @@ unsigned[1] methodNumber : dump ;
#
# Coordinate structure definition
#
unsigned[1] spaceUnitFlag : dump ;
unsigned[1] verticalCoordinateDefinition : dump ;
@ -41,7 +40,6 @@ unsigned[1] timeCoordinateDefinition : dump ;
#
# Position definition: mixed coordinates
#
unsigned[1] mixedCoordinateFieldFlag : dump ;
unsigned[1] coordinate1Flag : dump ;
@ -63,7 +61,6 @@ signed[4] coordinate2End : dump ;
#
# Data grid definitions
#
unsigned[1] coordinate3Flag : dump ;
unsigned[1] coordinate4Flag : dump ;
@ -87,7 +84,6 @@ flags[1] flagForNormalOrStaggeredGrid 'grib1/ocean.1.table' : dump;
#
# Auxiliary information
#
flags[1] flagForAnyFurtherInformation 'grib1/ocean.1.table' : dump;
unsigned[1] numberInHorizontalCoordinates : dump;
@ -101,13 +97,11 @@ unsigned[2] numberInTheAuxiliaryArray : dump ;
#
# Horizontal coordinate definition
#
unsigned[4] horizontalCoordinateSupplement[numberInHorizontalCoordinates] : dump;
#
# Mixed coordinate definition
#
unsigned[4] mixedCoordinateDefinition[numberInMixedCoordinateDefinition] : dump;
#
@ -120,17 +114,15 @@ if (numberInTheGridCoordinateList>0) {
#
# Auxiliary array
#
unsigned[4] auxiliary[numberInTheAuxiliaryArray] : dump;
#
# Post-auxiliary array
#
constant postAuxiliaryArrayPresent = 1;
if (flagShowingPostAuxiliaryArrayInUse == postAuxiliaryArrayPresent) {
unsigned[4] sizeOfPostAuxiliaryArrayPlusOne : dump;
unsigned[4] sizeOfPostAuxiliaryArrayPlusOne : dump;
meta sizeOfPostAuxiliaryArray evaluate(sizeOfPostAuxiliaryArrayPlusOne - 1);
if (sizeOfPostAuxiliaryArray>0) {
unsigned[4] postAuxiliary[sizeOfPostAuxiliaryArray] : dump;

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@ -21,173 +21,139 @@ constant isectionNumber2 = "h";
constant isectionNumber3 = "m";
constant isectionNumber4 = "z";
constant tsectionNumber3 = "v";
constant tsectionNumber4 = "z";
constant tsectionNumber5 = "m";
constant GRIB_DEPTH = 2;
constant GRIB_LONGITUDE = 3;
constant GRIB_LATITUDE = 4;
constant GRIB_DEPTH = 2;
constant GRIB_LONGITUDE = 3;
constant GRIB_LATITUDE = 4;
meta verificationDate g1verificationdate(dataDate, dataTime, endStep) : read_only;
if(horizontalCoordinateDefinition == 0)
{
if(coordinate1Flag == 1 )
{
# range
if(averaging1Flag == P_TAVG ){
if(
marsType == TYPE_OR
|| marsType == TYPE_FC
|| marsType == TYPE_FF
|| marsType == TYPE_FX
)
{
meta marsRange evaluate((coordinate1End - coordinate1Start)/3600);
alias mars.range = marsRange;
}
if (horizontalCoordinateDefinition == 0) {
if (coordinate1Flag == 1 ) {
# range
if (averaging1Flag == P_TAVG ) {
if (marsType == TYPE_OR
|| marsType == TYPE_FC
|| marsType == TYPE_FF
|| marsType == TYPE_FX)
{
meta marsRange evaluate((coordinate1End - coordinate1Start)/3600);
alias mars.range = marsRange;
}
}
# section
# section
if (coordinate2Flag == 2) { alias mars.section = isectionNumber2; }
if (coordinate2Flag == 3) { alias mars.section = isectionNumber3; }
if (coordinate2Flag == 4) { alias mars.section = isectionNumber4; }
if(coordinate2Flag == 2) { alias mars.section = isectionNumber2;}
if(coordinate2Flag == 3) { alias mars.section = isectionNumber3;}
if(coordinate2Flag == 4) { alias mars.section = isectionNumber4;}
# levelist latitude longitude
if(coordinate2Flag == GRIB_DEPTH){
meta marsLevelist divdouble( coordinate2Start,1000 );
meta roundedMarsLevelist round( marsLevelist ,1000);
alias mars.levelist = roundedMarsLevelist ;
}
if(coordinate2Flag == GRIB_LONGITUDE){
meta marsLongitude divdouble( coordinate2Start,1000000 );
meta roundedMarsLongitude round( marsLongitude ,1000);
alias mars.longitude = roundedMarsLongitude ;
}
if(coordinate2Flag == GRIB_LATITUDE){
meta marsLatitude divdouble( coordinate2Start,1000000 );
meta roundedMarsLatitude round( marsLatitude ,1000);
alias mars.latitude = roundedMarsLatitude ;
# levelist latitude longitude
if (coordinate2Flag == GRIB_DEPTH) {
meta marsLevelist divdouble( coordinate2Start,1000 );
meta roundedMarsLevelist round( marsLevelist ,1000);
alias mars.levelist = roundedMarsLevelist ;
}
if (coordinate2Flag == GRIB_LONGITUDE) {
meta marsLongitude divdouble( coordinate2Start,1000000 );
meta roundedMarsLongitude round( marsLongitude ,1000);
alias mars.longitude = roundedMarsLongitude ;
}
if (coordinate2Flag == GRIB_LATITUDE) {
meta marsLatitude divdouble( coordinate2Start,1000000 );
meta roundedMarsLatitude round( marsLatitude ,1000);
alias mars.latitude = roundedMarsLatitude ;
}
#product
if(averaging1Flag == 0) { alias mars.product = coordAveraging0;}
if(averaging1Flag == 1) { alias mars.product = coordAveraging1;}
if(averaging1Flag == 2) { alias mars.product = coordAveraging2;}
if(averaging1Flag == 3) { alias mars.product = coordAveraging3;}
#product
if (averaging1Flag == 0) { alias mars.product = coordAveraging0;}
if (averaging1Flag == 1) { alias mars.product = coordAveraging1;}
if (averaging1Flag == 2) { alias mars.product = coordAveraging2;}
if (averaging1Flag == 3) { alias mars.product = coordAveraging3;}
# date
if(
(marsType == TYPE_OR && averaging1Flag == P_TAVG)
# date
if ( (marsType == TYPE_OR && averaging1Flag == P_TAVG)
|| (marsType == TYPE_OR && averaging1Flag == P_TACC)
|| (marsType == TYPE_FX && averaging1Flag == P_TAVG)
)
{
|| (marsType == TYPE_FX && averaging1Flag == P_TAVG))
{
#remove mars.date;
alias mars.date = verificationDate;
#remove mars.step;
constant stepZero = 0;
alias mars.step = stepZero;
}
}
else
{
meta coordinateIndexNumber evaluate(coordinate4Flag+coordinate3Flag);
}
}
else
{
meta coordinateIndexNumber evaluate(coordinate4Flag+coordinate3Flag);
# levelist latitude longitude
if (coordinateIndexNumber== 3) {
meta marsLatitude divdouble( coordinate1Start,1000000);
meta marsLongitude divdouble( coordinate2Start,1000000);
if(coordinateIndexNumber== 3)
{
meta marsLatitude divdouble( coordinate1Start,1000000);
meta marsLongitude divdouble( coordinate2Start,1000000);
meta roundedMarsLatitude round( marsLatitude ,1000);
meta roundedMarsLongitude round( marsLongitude ,1000);
meta roundedMarsLatitude round( marsLatitude ,1000);
meta roundedMarsLongitude round( marsLongitude ,1000);
alias mars.latitude = roundedMarsLatitude ;
alias mars.longitude = roundedMarsLongitude ;
}
alias mars.latitude = roundedMarsLatitude ;
alias mars.longitude = roundedMarsLongitude ;
if (coordinateIndexNumber == 4) {
meta marsLevelist divdouble( coordinate1Start,1000);
meta marsLatitude divdouble( coordinate2Start,1000000);
}
meta roundedMarsLevelist round( marsLevelist ,1000);
meta roundedMarsLatitude round( marsLatitude ,1000);
if(coordinateIndexNumber == 4)
{
meta marsLevelist divdouble( coordinate1Start,1000);
meta marsLatitude divdouble( coordinate2Start,1000000);
alias mars.levelist = roundedMarsLevelist ;
alias mars.latitude = roundedMarsLatitude ;
}
meta roundedMarsLevelist round( marsLevelist ,1000);
meta roundedMarsLatitude round( marsLatitude ,1000);
if (coordinateIndexNumber == 5) {
meta marsLevelist divdouble( coordinate1Start,1000);
meta marsLongitude divdouble( coordinate2Start,1000000);
alias mars.levelist = roundedMarsLevelist ;
alias mars.latitude = roundedMarsLatitude ;
}
meta roundedMarsLevelist round( marsLevelist ,1000);
meta roundedMarsLongitude round( marsLongitude ,1000);
if(coordinateIndexNumber == 5)
{
meta marsLevelist divdouble( coordinate1Start,1000);
meta marsLongitude divdouble( coordinate2Start,1000000);
alias mars.levelist = roundedMarsLevelist ;
alias mars.longitude = roundedMarsLongitude ;
}
meta roundedMarsLevelist round( marsLevelist ,1000);
meta roundedMarsLongitude round( marsLongitude ,1000);
# section
if (coordinateIndexNumber == 3) { alias mars.section = tsectionNumber3; }
if (coordinateIndexNumber == 4) { alias mars.section = tsectionNumber4; }
if (coordinateIndexNumber == 5) { alias mars.section = tsectionNumber5; }
alias mars.levelist = roundedMarsLevelist ;
alias mars.longitude = roundedMarsLongitude ;
}
# section
if(coordinateIndexNumber == 3) { alias mars.section = tsectionNumber3;}
if(coordinateIndexNumber == 4) { alias mars.section = tsectionNumber4;}
if(coordinateIndexNumber == 5) { alias mars.section = tsectionNumber5;}
# range
if(averaging1Flag == P_INST){
if(
(marsType == TYPE_OR)
# range
if (averaging1Flag == P_INST) {
if ((marsType == TYPE_OR)
||(marsType == TYPE_FC)
||(marsType == TYPE_CF)
||(marsType == TYPE_PF)
||(marsType == TYPE_FF)
||(marsType == TYPE_OF)
)
||(marsType == TYPE_OF))
{
if( coordinate4Flag == 1){
if (coordinate4Flag == 1){
meta marsRange evaluate((coordinate4OfLastGridPoint - coordinate4OfFirstGridPoint)/3600);
}else{
} else {
meta marsRange evaluate((coordinate3OfLastGridPoint - coordinate3OfFirstGridPoint)/3600);
}
alias mars.range = marsRange;
alias mars.range = marsRange;
}
}
}
# product
alias mars.product = coordAveragingTims;
# date
if(marsType == TYPE_OR && averaging1Flag == P_INST){
if (marsType == TYPE_OR && averaging1Flag == P_INST) {
#remove mars.date;
alias mars.date = verificationDate;
#remove mars.step;
constant stepZero = 0;
alias mars.step =stepZero;
}
}
}
}

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@ -1,31 +1,24 @@
# (C) Copyright 2005- ECMWF.
#
# This software is licensed under the terms of the Apache Licence Version 2.0
# which can be obtained at http://www.apache.org/licenses/LICENSE-2.0.
#
# In applying this licence, ECMWF does not waive the privileges and immunities granted to it by
# virtue of its status as an intergovernmental organisation nor does it submit to any jurisdiction.
#
section_length[3] section4Length ;
section_length[3] section4Length;
unsigned[1] reserved=0 : hidden;
unsigned[1] reserved=0 : hidden;
flags[1] missingDataFlag 'grib1/1.table';
unsigned[1] numberOfBytesPerInteger ;
unsigned[2] reserved=0 : hidden;
unsigned[2] reserved=0 : hidden;
unsigned[3] numberOfChars ;
unsigned[3] numberOfChars;
unsigned[3] numberOfFloats ;
unsigned[3] numberOfFloats;
unsigned[3] numberOfInts ;
unsigned[3] numberOfInts;
unsigned[3] numberOfLogicals ;
unsigned[3] numberOfLogicals;
unsigned[3] numberOfReservedBytes ;
unsigned[3] numberOfReservedBytes;
unsigned[4] reserved=0 : hidden;
unsigned[4] reserved=0 : hidden;
@ -40,62 +33,57 @@ if(numberOfBytesPerInteger == 4) { signed[4] integerValues[numberOfInts]; }
if(numberOfChars >= 12)
{
ascii[2] marsClass;
ascii[2] dummy1;
ascii[2] marsType;
ascii[2] dummy2;
ascii[4] marsExpver;
ascii[2] marsClass;
ascii[2] dummy1;
ascii[2] marsType;
ascii[2] dummy2;
ascii[4] marsExpver;
constant numberOfRemaininChars = numberOfChars - 12;
constant numberOfRemaininChars = numberOfChars - 12;
charValues list(numberOfRemaininChars) {
ascii[1] char;
}
charValues list(numberOfRemaininChars) {
ascii[1] char;
}
constant zero = 0;
concept isEps(zero) { 1 = { marsType = "pf"; } }
concept isSens(zero) { 1 = { marsType = "sf"; } }
constant zero = 0;
concept isEps(zero) { 1 = { marsType = "pf"; } }
concept isSens(zero) { 1 = { marsType = "sf"; } }
constant oper = "oper";
constant oper = "oper";
concept marsStream(oper) {
"enfo" = { marsType = "pf"; }
"enfo" = { marsType = "cf"; }
"sens" = { marsType = "sf"; }
}
concept marsStream(oper) {
"enfo" = { marsType = "pf"; }
"enfo" = { marsType = "cf"; }
"sens" = { marsType = "sf"; }
}
if(isEps)
{
constant perturbationNumber = 0;
alias mars.number = perturbationNumber;
}
if(isEps)
{
constant perturbationNumber = 0;
alias mars.number = perturbationNumber;
}
if(isSens)
{
constant iterationNumber = 0;
constant diagnosticNumber = 0;
alias mars.iteration = iterationNumber;
alias mars.diagnostic = diagnosticNumber;
}
# This is commented out because some of the BUDG have the wrong info there
alias mars.stream = marsStream;
alias mars.class = marsClass;
alias mars.type = marsType;
alias mars.expver = marsExpver;
if(isSens)
{
constant iterationNumber = 0;
constant diagnosticNumber = 0;
alias mars.iteration = iterationNumber;
alias mars.diagnostic = diagnosticNumber;
}
# This is commented out because some of the BUDG have the wrong info there
alias mars.stream = marsStream;
alias mars.class = marsClass;
alias mars.type = marsType;
alias mars.expver = marsExpver;
}
else
{
charValues list(numberOfChars) {
ascii[1] char;
}
charValues list(numberOfChars) {
ascii[1] char;
}
}
#reservedBytes list (numberOfReservedBytes){
# unsigned[1] byte;
# }
# unsigned[1] byte;
#}

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@ -11,17 +11,17 @@ position startOfHeaders;
ascii[4] identifier = `WRAP`: dump;
alias ls.identifier=identifier;
uint64 totalLength : dump;
uint8 version = 1 : dump;
uint8 spare;
uint64 totalLength : dump;
uint8 version = 1 : dump;
uint8 spare;
template metadata "wrap/metadata.[version].def";
template metadata "wrap/metadata.[version].def";
position endOfHeadersMarker;
position endOfHeadersMarker;
constant dataLength = (totalLength - endOfHeadersMarker - 4);
blob data[dataLength] : dump;
ascii[4] endMark = `7777` : dump;
ascii[4] endMark = `7777` : dump;
position totalLength;
position totalLength;

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@ -56,7 +56,7 @@ int main(int argc, char** argv)
set = codes_fieldset_new_from_files(0, filenames, nfiles, keys, nkeys, 0, 0, &err);
CODES_CHECK(err, 0);
/* not jet implemented */
/* not yet implemented */
/* err=codes_fieldset_apply_where(set,"(centre=='ecmf') && number==1 || step==6 "); */
/* CODES_CHECK(err,0); */

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@ -57,7 +57,7 @@ int main(int argc, char** argv) {
set=grib_fieldset_new_from_files(0,filenames,nfiles,keys,nkeys,0,0,&err);
GRIB_CHECK(err,0);
/* not jet implemented */
/* not yet implemented */
/* err=grib_fieldset_apply_where(set,"(centre=='ecmf') && number==1 || step==6 "); */
/* GRIB_CHECK(err,0); */

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@ -1,18 +0,0 @@
#!/bin/sh
. ./include.sh
# To get verbose output
#$PYTHON -m unittest -v high_level_api
if [ $HAVE_PRODUCT_GRIB -eq 1 ]; then
echo 'Running tests for GRIB ...'
$PYTHON $examples_src/high_level_api_grib.py -v
rm -f test.index
fi
if [ $HAVE_PRODUCT_BUFR -eq 1 ]; then
echo 'Running tests for BUFR ...'
$PYTHON $examples_src/high_level_api_bufr.py -v
rm -f test.index
fi

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@ -1,211 +0,0 @@
#!/bin/env python
"""
Unit tests for high level Python interface for BUFR.
Author: Daniel Lee, DWD, 2016
"""
import os
from tempfile import NamedTemporaryFile
import unittest
from eccodes import BufrFile, BufrMessage
TESTBUFR = "../../data/bufr/syno_multi.bufr"
TEST_OUTPUT = "test-output.codes"
KNOWN_BUFR_KEYS = ['edition', 'masterTableNumber', 'bufrHeaderSubCentre', 'bufrHeaderCentre',
'updateSequenceNumber', 'dataCategory', 'dataSubCategory', 'masterTablesVersionNumber',
'localTablesVersionNumber', 'typicalYearOfCentury', 'typicalMonth', 'typicalDay',
'typicalHour', 'typicalMinute', 'typicalDate', 'typicalTime', 'rdbType', 'newSubtype', 'rdbtimeDay',
'rdbtimeHour', 'rdbtimeMinute', 'rdbtimeSecond', 'rectimeDay', 'rectimeHour', 'rectimeMinute', 'rectimeSecond',
'correction1', 'correction1Part', 'correction2', 'correction2Part', 'correction3', 'correction3Part',
'correction4', 'correction4Part', 'qualityControl', 'numberOfSubsets', 'localLatitude',
'localLongitude', 'observedData', 'compressedData', 'unexpandedDescriptors', 'subsetNumber', '#1#blockNumber',
'#1#blockNumber->percentConfidence', '#1#stationNumber', '#1#stationNumber->percentConfidence',
'#1#stationType', '#1#stationType->percentConfidence', '#1#year', '#1#year->percentConfidence',
'#1#month', '#1#month->percentConfidence', '#1#day', '#1#day->percentConfidence', '#1#hour',
'#1#hour->percentConfidence', '#1#minute', '#1#minute->percentConfidence', '#1#latitude',
'#1#latitude->percentConfidence', '#1#longitude', '#1#longitude->percentConfidence',
'#1#heightOfStation', '#1#heightOfStation->percentConfidence', '#1#nonCoordinatePressure',
'#1#nonCoordinatePressure->percentConfidence', '#1#pressureReducedToMeanSeaLevel',
'#1#pressureReducedToMeanSeaLevel->percentConfidence', '#1#3HourPressureChange',
'#1#3HourPressureChange->percentConfidence', '#1#characteristicOfPressureTendency',
'#1#characteristicOfPressureTendency->percentConfidence', '#1#windDirectionAt10M',
'#1#windDirectionAt10M->percentConfidence', '#1#windSpeedAt10M',
'#1#windSpeedAt10M->percentConfidence',
'#1#airTemperatureAt2M', '#1#airTemperatureAt2M->percentConfidence', '#1#dewpointTemperatureAt2M',
'#1#dewpointTemperatureAt2M->percentConfidence', '#1#relativeHumidity',
'#1#relativeHumidity->percentConfidence', '#1#horizontalVisibility',
'#1#horizontalVisibility->percentConfidence', '#1#presentWeather',
'#1#presentWeather->percentConfidence', '#1#pastWeather1', '#1#pastWeather1->percentConfidence',
'#1#pastWeather2', '#1#pastWeather2->percentConfidence', '#1#cloudCoverTotal',
'#1#cloudCoverTotal->percentConfidence', '#1#verticalSignificanceSurfaceObservations',
'#1#verticalSignificanceSurfaceObservations->percentConfidence', '#1#cloudAmount',
'#1#cloudAmount->percentConfidence', '#1#heightOfBaseOfCloud',
'#1#heightOfBaseOfCloud->percentConfidence', '#1#cloudType', '#1#cloudType->percentConfidence',
'#2#cloudType', '#2#cloudType->percentConfidence', '#3#cloudType', '#3#cloudType->percentConfidence',
'#2#verticalSignificanceSurfaceObservations',
'#2#verticalSignificanceSurfaceObservations->percentConfidence',
'#2#cloudAmount', '#2#cloudAmount->percentConfidence', '#4#cloudType',
'#4#cloudType->percentConfidence', '#2#heightOfBaseOfCloud',
'#2#heightOfBaseOfCloud->percentConfidence',
'#3#verticalSignificanceSurfaceObservations',
'#3#verticalSignificanceSurfaceObservations->percentConfidence',
'#3#cloudAmount', '#3#cloudAmount->percentConfidence', '#5#cloudType',
'#5#cloudType->percentConfidence',
'#3#heightOfBaseOfCloud', '#3#heightOfBaseOfCloud->percentConfidence',
'#4#verticalSignificanceSurfaceObservations',
'#4#verticalSignificanceSurfaceObservations->percentConfidence', '#4#cloudAmount',
'#4#cloudAmount->percentConfidence',
'#6#cloudType', '#6#cloudType->percentConfidence', '#4#heightOfBaseOfCloud',
'#4#heightOfBaseOfCloud->percentConfidence',
'#5#verticalSignificanceSurfaceObservations',
'#5#verticalSignificanceSurfaceObservations->percentConfidence', '#5#cloudAmount',
'#5#cloudAmount->percentConfidence', '#7#cloudType', '#7#cloudType->percentConfidence',
'#5#heightOfBaseOfCloud',
'#5#heightOfBaseOfCloud->percentConfidence', '#1#totalPrecipitationPast6Hours',
'#1#totalPrecipitationPast6Hours->percentConfidence', '#1#totalSnowDepth',
'#1#totalSnowDepth->percentConfidence',
'#1#centre', '#1#generatingApplication']
class TestBufrFile(unittest.TestCase):
"""Test BufrFile functionality."""
def test_memory_management(self):
"""Messages in BufrFile can be opened and closed properly."""
with BufrFile(TESTBUFR) as bufr_file:
self.assertEqual(len(bufr_file), 3)
for i in range(len(bufr_file)):
msg = BufrMessage(bufr_file)
self.assertEqual(msg["bufrHeaderCentre"], 98)
self.assertEqual(msg['count'], i + 1)
self.assertEqual(len(bufr_file.open_messages), 3)
self.assertEqual(len(bufr_file.open_messages), 0)
def test_message_counting_works(self):
"""The BufrFile is aware of its messages."""
with BufrFile(TESTBUFR) as bufr_file:
msg_count = len(bufr_file)
self.assertEqual(msg_count, 3)
def test_iterator_protocol(self):
"""The BufrFile allows pythonic iteration over all messages."""
latitudes = []
with BufrFile(TESTBUFR) as bufr_file:
for msg in bufr_file:
latitudes.append(msg["localLatitude"])
self.assertSequenceEqual(latitudes, [70.93, 77, 78.92])
def test_read_past_last_message(self):
"""Trying to open message on exhausted BUFR file raises IOError."""
with BufrFile(TESTBUFR) as bufr_file:
for _ in range(len(bufr_file)):
BufrMessage(bufr_file)
self.assertRaises(IOError, lambda: BufrMessage(bufr_file))
def test_read_invalid_file(self):
"""Trying to open message on nonexistent file raises IOError."""
with NamedTemporaryFile(mode='r') as f:
with BufrFile(f.name) as bufr_file:
self.assertRaises(IOError, lambda: BufrMessage(bufr_file))
class TestBufrMessage(unittest.TestCase):
"""Test BufrMessage functionality"""
def test_metadata(self):
"""Metadata is read correctly from BufrMessage."""
with BufrFile(TESTBUFR) as bufr_file:
msg = BufrMessage(bufr_file)
msg.unpack()
msg_keys = list(msg.keys())
self.assertEqual(len(msg_keys), 202)
for key in KNOWN_BUFR_KEYS:
assert key in msg_keys
# Size of message in bytes
self.assertEqual(msg.size(), 220)
self.assertEqual(len(list(msg.keys())), len(msg))
def test_content(self):
"""Data values are read correctly from BufrMessage."""
with BufrFile(TESTBUFR) as bufr_file:
msg = BufrMessage(bufr_file)
msg.unpack()
self.assertEqual(msg["airTemperatureAt2M"], 274.5)
# TODO: Test behaviour with missing messages (SUP-1874)
def test_value_setting(self):
"""Keys can be set properly."""
with BufrFile(TESTBUFR) as bufr_file:
msg = BufrMessage(bufr_file)
key, val = "localLongitude", 5
msg[key] = val
self.assertEqual(msg[key], val)
def test_serialize(self):
"""Message can be serialized to file."""
with BufrFile(TESTBUFR) as bufr_file:
msg = BufrMessage(bufr_file)
with open(TEST_OUTPUT, "wb") as test:
msg.write(test)
os.unlink(TEST_OUTPUT)
def test_clone(self):
"""Messages can be used to produce clone Messages."""
with BufrFile(TESTBUFR) as bufr_file:
msg = BufrMessage(bufr_file)
msg2 = BufrMessage(clone=msg)
self.assertSequenceEqual(list(msg.keys()), list(msg2.keys()))
def test_copy_data(self):
"""Can copy data section from one message to another"""
bufr = BufrMessage(sample='BUFR3')
with BufrFile('../../data/bufr/metar_with_2_bias.bufr') as bufr_file:
bufrin = BufrMessage(bufr_file)
ivalues = (
0, 0, 0, 0, 0, 0, 0, 0, 0, 0,
0, 0, 0, 0, 0, 0, 0, 0, 0, 0,
0, 0, 0, 1, 1, 1, 1, 1, 1, 1,
1, 1, 1, 1, 1, 1, 1, 1, 1, 1,
1, 1, 1, 1, 1, 0, 1, 1, 1, 1,
1, 1, 1, 1, 1, 1, 1, 1, 1, 1,
1, 1, 1, 1, 1, 1, 1, 1, 0)
bufr['inputDataPresentIndicator'] = ivalues
bufr['edition'] = 3
bufr['masterTableNumber'] = 0
bufr['bufrHeaderSubCentre'] = 0
bufr['bufrHeaderCentre'] = 98
bufr['updateSequenceNumber'] = 1
bufr['dataCategory'] = 0
bufr['dataSubCategory'] = 140
bufr['masterTablesVersionNumber'] = 13
bufr['localTablesVersionNumber'] = 1
bufr['typicalYearOfCentury'] = 15
bufr['typicalMonth'] = 5
bufr['typicalDay'] = 4
bufr['typicalHour'] = 9
bufr['typicalMinute'] = 30
bufr['numberOfSubsets'] = 1
bufr['observedData'] = 1
bufr['compressedData'] = 0
ivalues = (
307011, 7006, 10004, 222000, 101023, 31031, 1031, 1032, 101023, 33007,
225000, 236000, 101023, 31031, 1031, 1032, 8024, 101001, 225255, 225000,
236000, 101023, 31031, 1031, 1032, 8024, 101001, 225255,
1063, 2001, 4001, 4002, 4003, 4004, 4005, 5002,
6002, 7001, 7006, 11001, 11016, 11017, 11002)
bufr['unexpandedDescriptors'] = ivalues
bufrin.unpack()
bufrin.copy_data(bufr)
with open(TEST_OUTPUT, 'wb') as test:
bufr.write(test)
os.unlink(TEST_OUTPUT)
if __name__ == "__main__":
unittest.main()

View File

@ -1,257 +0,0 @@
#!/bin/env python
"""
This is now deprecated. Use cfgrib instead
"""
import os
from tempfile import NamedTemporaryFile
import unittest
from eccodes import GribFile
from eccodes import GribIndex
from eccodes import GribMessage
from eccodes.high_level.gribmessage import IndexNotSelectedError
TESTGRIB = "../../data/high_level_api.grib2"
TEST_OUTPUT = "test-output.codes"
TEST_INDEX = "test.index"
TEST_KEYS = ("dataDate", "stepRange")
TEST_VALUES = 20110225, 0
SELECTION_DICTIONARY = {}
for i1 in range(len(TEST_KEYS)):
SELECTION_DICTIONARY[TEST_KEYS[i1]] = TEST_VALUES[i1]
TEST_INDEX_OUTPUT = TESTGRIB
TEST_STEPRANGE = ('0', '12', '18', '24', '6')
# These keys should be available even if new keys are defined
KNOWN_GRIB_KEYS = ['7777', 'GRIBEditionNumber', 'N', 'NV',
'Ni', 'Nj', 'PLPresent', 'PVPresent', 'addEmptySection2',
'addExtraLocalSection', 'alternativeRowScanning',
'angleDivisor', 'angleSubdivisions',
'average', 'backgroundProcess', 'basicAngleOfTheInitialProductionDomain',
'binaryScaleFactor', 'bitMapIndicator', 'bitmapPresent',
'bitsPerValue', 'bottomLevel', 'centre',
'centreDescription', 'cfName', 'cfNameECMF', 'cfVarName',
'cfVarNameECMF', 'changeDecimalPrecision', 'class',
'climateDateFrom', 'climateDateTo', 'codedValues',
'dataDate', 'dataRepresentationTemplateNumber', 'dataTime',
'day', 'decimalPrecision', 'decimalScaleFactor',
'deleteCalendarId', 'deleteExtraLocalSection', 'deletePV',
'discipline', 'distinctLatitudes', 'distinctLongitudes',
'editionNumber', 'endStep', 'eps',
'experimentVersionNumber', 'extraLocalSectionPresent',
'forecastTime', 'g2grid', 'gaussianGridName',
'genVertHeightCoords', 'generatingProcessIdentifier',
'getNumberOfValues', 'global', 'globalDomain',
'grib2LocalSectionNumber', 'grib2LocalSectionPresent',
'grib2divider', 'gridDefinitionDescription',
'gridDefinitionTemplateNumber',
'gridDescriptionSectionPresent', 'gridType', 'hour',
'hoursAfterDataCutoff', 'iDirectionIncrement',
'iDirectionIncrementGiven', 'iDirectionIncrementInDegrees',
'iScansNegatively', 'iScansPositively', 'identifier',
'ieeeFloats', 'ifsParam', 'ijDirectionIncrementGiven',
'indicatorOfUnitOfTimeRange',
'interpretationOfNumberOfPoints', 'isConstant',
'isHindcast', 'isOctahedral', 'is_uerra',
'jDirectionIncrementGiven', 'jPointsAreConsecutive',
'jScansPositively', 'julianDay', 'kurtosis', 'latLonValues',
'latitudeOfFirstGridPoint', 'latitudeOfFirstGridPointInDegrees',
'latitudeOfLastGridPoint', 'latitudeOfLastGridPointInDegrees', 'latitudes',
'legBaseDate', 'legBaseTime', 'legNumber',
'lengthOfHeaders', 'level', 'localDefinitionNumber',
'localDir', 'localTablesVersion',
'longitudeOfFirstGridPoint', 'longitudeOfFirstGridPointInDegrees',
'longitudeOfLastGridPoint', 'longitudeOfLastGridPointInDegrees', 'longitudes',
'mAngleMultiplier', 'mBasicAngle', 'marsClass',
'marsStream', 'marsType', 'masterDir', 'maximum',
'md5Headers', 'md5Section1', 'md5Section3', 'md5Section4',
'md5Section5', 'md5Section6', 'md5Section7', 'minimum',
'minute', 'minutesAfterDataCutoff', 'missingValue',
'modelName', 'month', 'name', 'nameECMF',
'nameOfFirstFixedSurface', 'nameOfSecondFixedSurface',
'neitherPresent', 'numberOfDataPoints',
'numberOfForecastsInEnsemble', 'numberOfMissing',
'numberOfOctectsForNumberOfPoints', 'numberOfSection',
'numberOfValues', 'oceanAtmosphereCoupling',
'offsetValuesBy', 'optimizeScaleFactor', 'packingError',
'packingType', 'paramId', 'paramIdECMF',
'parameterCategory', 'parameterName', 'parameterNumber',
'parameterUnits', 'perturbationNumber', 'pressureUnits',
'productDefinitionTemplateNumber',
'productDefinitionTemplateNumberInternal', 'productType',
'productionStatusOfProcessedData', 'radius',
'referenceDate', 'referenceValue', 'referenceValueError',
'resolutionAndComponentFlags', 'resolutionAndComponentFlags1',
'resolutionAndComponentFlags2', 'resolutionAndComponentFlags6',
'resolutionAndComponentFlags7', 'resolutionAndComponentFlags8',
'scaleFactorOfEarthMajorAxis', 'scaleFactorOfEarthMinorAxis',
'scaleFactorOfFirstFixedSurface', 'scaleFactorOfRadiusOfSphericalEarth',
'scaleFactorOfSecondFixedSurface', 'scaleValuesBy',
'scaledValueOfEarthMajorAxis', 'scaledValueOfEarthMinorAxis',
'scaledValueOfFirstFixedSurface', 'scaledValueOfRadiusOfSphericalEarth',
'scaledValueOfSecondFixedSurface', 'scanningMode',
'scanningMode5', 'scanningMode6', 'scanningMode7',
'scanningMode8', 'second', 'section0Length',
'section1Length', 'section2Length', 'section2Padding',
'section3Length', 'section3Padding', 'section4Length',
'section5Length', 'section6Length', 'section7Length',
'section8Length', 'sectionNumber', 'selectStepTemplateInstant', 'selectStepTemplateInterval',
'setBitsPerValue', 'setCalendarId', 'shapeOfTheEarth',
'shortName', 'shortNameECMF', 'significanceOfReferenceTime',
'skewness', 'sourceOfGridDefinition', 'standardDeviation',
'startStep', 'stepRange', 'stepType', 'stepTypeInternal',
'stepUnits', 'stream', 'subCentre',
'subdivisionsOfBasicAngle', 'tablesVersion',
'tablesVersionLatest', 'tempPressureUnits', 'topLevel',
'totalLength', 'type', 'typeOfEnsembleForecast',
'typeOfFirstFixedSurface', 'typeOfGeneratingProcess',
'typeOfLevel', 'typeOfOriginalFieldValues',
'typeOfProcessedData', 'typeOfSecondFixedSurface', 'units',
'unitsECMF', 'unitsOfFirstFixedSurface',
'unitsOfSecondFixedSurface', 'unpackedError',
'uvRelativeToGrid', 'validityDate', 'validityTime',
'values', 'year']
class TestGribFile(unittest.TestCase):
"""Test GribFile functionality."""
def test_memory_management(self):
"""Messages in GribFile can be opened and closed properly."""
with GribFile(TESTGRIB) as grib_file:
self.assertEqual(len(grib_file), 5)
for i in range(len(grib_file)):
msg = GribMessage(grib_file)
self.assertEqual(msg["shortName"], "msl")
self.assertEqual(msg['count'], i + 1)
self.assertEqual(len(grib_file.open_messages), 5)
self.assertEqual(len(grib_file.open_messages), 0)
def test_message_counting_works(self):
"""The GribFile is aware of its messages."""
with GribFile(TESTGRIB) as grib_file:
msg_count = len(grib_file)
self.assertEqual(msg_count, 5)
def test_iterator_protocol(self):
"""The GribFile allows pythonic iteration over all messages."""
step_ranges = []
with GribFile(TESTGRIB) as grib_file:
for msg in grib_file:
step_ranges.append(msg["stepRange"])
self.assertSequenceEqual(step_ranges, ["0", "6", "12", "18", "24"])
def test_read_past_last_message(self):
"""Trying to open message on exhausted GRIB file raises IOError."""
with GribFile(TESTGRIB) as grib_file:
for _ in range(len(grib_file)):
GribMessage(grib_file)
self.assertRaises(IOError, lambda: GribMessage(grib_file))
def test_read_invalid_file(self):
"""Trying to open message on nonexistent GRIB file raises IOError."""
with NamedTemporaryFile(mode='r') as f:
with GribFile(f.name) as grib_file:
self.assertRaises(IOError, lambda: GribMessage(grib_file))
class TestGribMessage(unittest.TestCase):
"""Test GribMessage functionality."""
def test_metadata(self):
"""Metadata is read correctly from GribMessage."""
with GribFile(TESTGRIB) as grib_file:
msg = GribMessage(grib_file)
msg_keys = list(msg.keys())
for key in KNOWN_GRIB_KEYS:
assert key in msg_keys, "key '%s' not found" % key
# Size of message in bytes
self.assertEqual(msg.size(), 160219)
self.assertEqual(len(list(msg.keys())), len(msg))
def test_missing_message_behaviour(self):
"""Key with MISSING value."""
with GribFile(TESTGRIB) as grib_file:
msg = GribMessage(grib_file)
self.assertTrue(msg.missing("scaleFactorOfSecondFixedSurface"))
msg["scaleFactorOfSecondFixedSurface"] = 5
msg.set_missing("scaleFactorOfSecondFixedSurface")
# with self.assertRaises(KeyError):
# msg["scaleFactorOfSecondFixedSurface"]
def test_value_setting(self):
"""Keys can be set properly."""
with GribFile(TESTGRIB) as grib_file:
msg = GribMessage(grib_file)
msg["scaleFactorOfSecondFixedSurface"] = 5
msg["values"] = [1, 2, 3]
self.assertEqual(msg['scaleFactorOfSecondFixedSurface'], 5)
def test_multi_value_setting(self):
"""Multiple keys/values can be set properly."""
msg = GribMessage(sample='GRIB1')
msg['paramId', 'stepType', 'edition'] = 49, 'avg', 2
self.assertEqual(msg['shortName'], '10fg')
# Another test
with GribFile(TESTGRIB) as grib_file:
msg = GribMessage(grib_file)
msg['setLocalDefinition', 'localDefinitionNumber'] = 1, 25
msg['typeOfFirstFixedSurface', 'typeOfSecondFixedSurface'] = 1, 8
msg[('typeOfFirstFixedSurface', 'typeOfSecondFixedSurface')] = (1, 8) # Also works
self.assertEqual(msg['localDefinitionNumber'], 25)
self.assertEqual(msg['typeOfLevel'], 'entireAtmosphere')
def test_serialize(self):
"""Message can be serialized to file."""
with GribFile(TESTGRIB) as grib_file:
msg = GribMessage(grib_file)
with open(TEST_OUTPUT, "wb") as test:
msg.write(test)
os.unlink(TEST_OUTPUT)
def test_clone(self):
"""Messages can be used to produce clone Messages."""
with GribFile(TESTGRIB) as grib_file:
msg = GribMessage(grib_file)
msg2 = GribMessage(clone=msg)
self.assertSequenceEqual(list(msg.keys()), list(msg2.keys()))
class TestGribIndex(unittest.TestCase):
"""Test GribIndex functionality."""
def test_memory_management(self):
"""GribIndex closes GribMessages properly."""
with GribIndex(TESTGRIB, TEST_KEYS) as idx:
idx.select(SELECTION_DICTIONARY)
self.assertEqual(len(idx.open_messages), 1)
self.assertEqual(len(idx.open_messages), 0)
def test_create_and_serialize_index(self):
"""GribIndex can be saved to file, file can be added to index."""
with GribIndex(TESTGRIB, TEST_KEYS) as idx:
idx.write(TEST_INDEX)
with GribIndex(file_index=TEST_INDEX) as idx:
idx.add(TESTGRIB)
os.unlink(TEST_INDEX)
def test_index_comprehension(self):
"""GribIndex understands underlying GRIB index properly."""
with GribIndex(TESTGRIB, TEST_KEYS) as idx:
self.assertEqual(idx.size(TEST_KEYS[1]), 5)
self.assertSequenceEqual(idx.values(TEST_KEYS[1]), TEST_STEPRANGE)
with self.assertRaises(IndexNotSelectedError):
# Note: The following will issue a message to stderr:
# ECCODES ERROR : please select a value for index key "dataDate"
# This is expected behaviour
idx.select({TEST_KEYS[1]: TEST_VALUES[0]})
# Now it will be OK as we have selected all necessary keys
idx.select(SELECTION_DICTIONARY)
self.assertEqual(len(idx.open_messages), 1)
if __name__ == "__main__":
unittest.main()

View File

@ -0,0 +1,199 @@
# (C) Copyright 2005- ECMWF.
#
# This software is licensed under the terms of the Apache Licence Version 2.0
# which can be obtained at http://www.apache.org/licenses/LICENSE-2.0.
#
# In applying this licence, ECMWF does not waive the privileges and immunities
# granted to it by virtue of its status as an intergovernmental organisation
# nor does it submit to any jurisdiction.
import traceback
import sys
import os
import re
import getopt
from eccodes import *
VERBOSE = 1 # verbose error reporting
DEBUG = 0
def usage():
progname = os.path.basename(sys.argv[0])
print("Usage: ", progname, "[options] bufr_file")
print("Options:")
print("\t-e generate the file defining Table B descriptors (element.table)")
print("\t-s generate the file defining Table D descriptors (sequence.def)")
print("")
def infer_type(units, scale):
ktype = "double"
if re.search("^CCITT", units) or re.search("^CHARACTER", units):
return "string"
if re.search("CODE\s*TABLE", units):
return "table"
if re.search("FLAG\s*TABLE", units):
return "flag"
if re.search("NUMERIC", units) or int(scale) <= 0:
return "long"
return ktype
def generate_tables(INPUT, what):
assert what in ("element", "sequence")
f = open(INPUT, "rb")
cnt = 0
if what == "element":
print("#code|abbreviation|type|name|unit|scale|reference|width")
# loop for the messages in the file
while 1:
# get handle for message
bufr = codes_bufr_new_from_file(f)
if bufr is None:
break
# Sanity check
if codes_get(bufr, "dataCategory") != 11:
# print('BUFR message dataCategory must be 11 (BUFR tables). Ignoring')
codes_release(bufr)
continue
if codes_get(bufr, "numberOfSubsets") == 0:
# print('BUFR message number of subsets == 0. Ignoring')
codes_release(bufr)
continue
if DEBUG:
print(f"Processing message {cnt+1}")
codes_set(bufr, "unpack", 1)
# Each table message contains three delayed replications (031001):
# First is for Table A (skipped), second for Table B and third for Table D
replications = codes_get_array(bufr, "delayedDescriptorReplicationFactor")
fDesc = codes_get_array(bufr, "fDescriptorToBeAddedOrDefined")
xDesc = codes_get_array(bufr, "xDescriptorToBeAddedOrDefined")
yDesc = codes_get_array(bufr, "yDescriptorToBeAddedOrDefined")
assert len(fDesc) == len(xDesc)
assert len(fDesc) == len(yDesc)
assert len(replications) > 0
assert len(fDesc) == replications[1] + replications[2]
if what == "element":
try:
elementName1 = codes_get_array(bufr, "elementNameLine1")
elementName2 = codes_get_array(bufr, "elementNameLine2")
unitsName = codes_get_array(bufr, "unitsName")
unitsScaleSign = codes_get_array(bufr, "unitsScaleSign")
unitsScale = codes_get_array(bufr, "unitsScale")
unitsReferenceSign = codes_get_array(bufr, "unitsReferenceSign")
unitsReferenceValue = codes_get_array(bufr, "unitsReferenceValue")
elementDataWidth = codes_get_array(bufr, "elementDataWidth")
except CodesInternalError as err:
if DEBUG:
print("No element descriptors found")
pass
for i in range(len(fDesc)):
fd = fDesc[i]
xd = xDesc[i]
yd = yDesc[i]
if fd == "0":
# ecCodes key (abbreviation) => first word of elementNameLine1
el1 = elementName1[i].rstrip()
key = str.split(el1)[0]
# description (name) => Combine rest of elementNameLine1 and elementNameLine2
desc = " ".join(str.split(el1)[1:]) + elementName2[i].rstrip()
if len(desc) == 0:
desc = key
units = unitsName[i].rstrip()
sign = unitsScaleSign[i]
scale = int(unitsScale[i])
if sign == "-":
scale = -1 * scale
sign = unitsReferenceSign[i]
reference = int(unitsReferenceValue[i])
if sign == "-":
reference = -1 * reference
width = elementDataWidth[i].rstrip()
ktype = infer_type(units, scale)
print(
f"{fd}{xd}{yd}|{key}|{ktype}|{desc}|{units}|{scale}|{reference}|{width}"
)
if what == "sequence":
try:
descriptorDefiningSequence = codes_get_array(
bufr, "descriptorDefiningSequence"
)
except CodesInternalError as err:
if DEBUG:
print("No sequence descriptors found")
pass
k = 0
rindex = 3 # From index 3 onwards we have the contents of sequences
for i in range(len(fDesc)):
fd = fDesc[i]
xd = xDesc[i]
yd = yDesc[i]
if fd == "3":
repls = replications[rindex]
if repls:
print(f'"{fd}{xd}{yd}" = [ ', end="")
comma = ","
for j in range(repls):
seq = descriptorDefiningSequence[k + j]
if j == repls - 1:
comma = ""
print(f"{seq}{comma} ", end="")
k = k + repls
rindex = rindex + 1
print("]")
cnt += 1
codes_release(bufr)
f.close()
def main():
if len(sys.argv) < 2:
usage()
return 1
try:
what = "element"
options = "es"
opts, args = getopt.getopt(sys.argv[1:], options)
for o, a in opts:
if o == "-e":
what = "element"
elif o == "-s":
what = "sequence"
else:
assert False, "Invalid option"
# Check we have a BUFR file to process
if not args:
usage()
return 1
for arg in args:
generate_tables(arg, what)
except getopt.GetoptError as err:
print("Error: ", err)
usage()
return 1
except CodesInternalError as err:
if VERBOSE:
traceback.print_exc(file=sys.stderr)
else:
sys.stderr.write(err.msg + "\n")
return 1
if __name__ == "__main__":
sys.exit(main())

View File

@ -1,12 +1,54 @@
#!/usr/bin/env python
from __future__ import print_function
import argparse
import binascii
import os
import re
import sys
import binascii
import time
assert len(sys.argv) > 2
parser = argparse.ArgumentParser()
parser.add_argument(
"-n",
"--count",
type=int,
default=10,
help="Number of files to generate",
)
parser.add_argument(
"-C",
"--chunk",
type=int,
default=16,
help="Chunk size (MB)",
)
parser.add_argument(
"-o",
"--output",
type=str,
default="memfs_gen",
help="Name of C file to generate",
)
parser.add_argument(
"-e",
"--exclude",
help="Exclude packages",
)
parser.add_argument(
"dirs",
type=str,
nargs="+",
help="The list of directories to process",
)
args = parser.parse_args()
start = time.time()
print("MEMFS: starting")
@ -14,29 +56,24 @@ print("MEMFS: starting")
# Exclude experimental features e.g. GRIB3 and TAF
# The BUFR codetables is not used in the engine
EXCLUDED = ["grib3", "codetables", "taf", "stations"]
EXPECTED_FCOUNT = 6
pos = 1
if sys.argv[1] == "-exclude":
product = sys.argv[2]
if product == "bufr":
EXCLUDED.append(product)
EXPECTED_FCOUNT = 4
elif product == "grib":
EXCLUDED.extend(["grib1", "grib2"])
EXPECTED_FCOUNT = 2
else:
assert False, "Invalid product %s" % product
pos = 3
EXCLUDE = {
None: [],
"bufr": ["bufr"],
"grib": ["grib1", "grib2"],
}
dirs = [os.path.realpath(x) for x in sys.argv[pos:-1]]
EXCLUDED.extend(EXCLUDE[args.exclude])
dirs = [os.path.realpath(x) for x in args.dirs]
print("Directories: ", dirs)
print("Excluding: ", EXCLUDED)
FILES = {}
SIZES = {}
NAMES = []
CHUNK = 16 * 1024 * 1024 # chunk size in bytes
CHUNK = args.chunk * 1024 * 1024 # chunk size in bytes
# Binary to ASCII function. Different in Python 2 and 3
try:
@ -51,10 +88,11 @@ def get_outfile_name(base, count):
# The last argument is the base name of the generated C file(s)
output_file_base = sys.argv[-1]
output_file_base = args.output
buffer = None
fcount = -1
fcount = 0
MAX_FCOUNT = args.count
for directory in dirs:
@ -69,8 +107,8 @@ for directory in dirs:
for name in files:
if buffer is None:
fcount += 1
opath = get_outfile_name(output_file_base, fcount)
fcount += 1
print("MEMFS: Generating output:", opath)
buffer = open(opath, "w")
@ -119,9 +157,19 @@ for directory in dirs:
if buffer is not None:
buffer.close()
assert fcount <= MAX_FCOUNT, fcount
while fcount < MAX_FCOUNT:
opath = get_outfile_name(output_file_base, fcount)
print("MEMFS: Generating output:", opath, "(empty)")
with open(opath, "w") as f:
# ISO compilers issue a warning for an empty translation unit
# so add a dummy declaration to suppress this
print("struct eccodes_suppress_iso_warning;/* empty */", file=f)
fcount += 1
# The number of generated C files is hard coded.
# See memfs/CMakeLists.txt
assert fcount == EXPECTED_FCOUNT, fcount
opath = output_file_base + "_final.c"
print("MEMFS: Generating output:", opath)
g = open(opath, "w")

View File

@ -1,3 +1,10 @@
# Note: the count 10 of generated C files must match
# the 'generated_c_files' list
list( APPEND memfs_args
--count 10
--output ${CMAKE_CURRENT_BINARY_DIR}/memfs_gen
)
set( generated_c_files
${CMAKE_CURRENT_BINARY_DIR}/memfs_gen_000.c
${CMAKE_CURRENT_BINARY_DIR}/memfs_gen_001.c
@ -6,35 +13,26 @@ set( generated_c_files
${CMAKE_CURRENT_BINARY_DIR}/memfs_gen_004.c
${CMAKE_CURRENT_BINARY_DIR}/memfs_gen_005.c
${CMAKE_CURRENT_BINARY_DIR}/memfs_gen_006.c
${CMAKE_CURRENT_BINARY_DIR}/memfs_gen_007.c
${CMAKE_CURRENT_BINARY_DIR}/memfs_gen_008.c
${CMAKE_CURRENT_BINARY_DIR}/memfs_gen_009.c
${CMAKE_CURRENT_BINARY_DIR}/memfs_gen_final.c)
set( exclude "" )
if( NOT HAVE_PRODUCT_BUFR )
set( exclude -exclude bufr )
set( generated_c_files
${CMAKE_CURRENT_BINARY_DIR}/memfs_gen_000.c
${CMAKE_CURRENT_BINARY_DIR}/memfs_gen_001.c
${CMAKE_CURRENT_BINARY_DIR}/memfs_gen_002.c
${CMAKE_CURRENT_BINARY_DIR}/memfs_gen_003.c
${CMAKE_CURRENT_BINARY_DIR}/memfs_gen_004.c
${CMAKE_CURRENT_BINARY_DIR}/memfs_gen_final.c)
elseif( NOT HAVE_PRODUCT_GRIB )
set( exclude -exclude grib )
set( generated_c_files
${CMAKE_CURRENT_BINARY_DIR}/memfs_gen_000.c
${CMAKE_CURRENT_BINARY_DIR}/memfs_gen_001.c
${CMAKE_CURRENT_BINARY_DIR}/memfs_gen_002.c
${CMAKE_CURRENT_BINARY_DIR}/memfs_gen_final.c)
list( APPEND memfs_args --exclude bufr)
endif()
if( NOT HAVE_PRODUCT_GRIB )
list( APPEND memfs_args --exclude grib)
endif()
add_custom_command(
OUTPUT ${generated_c_files}
COMMAND ${PYTHON_EXECUTABLE} ${PROJECT_SOURCE_DIR}/memfs.py
${exclude}
${memfs_args}
${PROJECT_SOURCE_DIR}/definitions
${PROJECT_SOURCE_DIR}/samples
${PROJECT_SOURCE_DIR}/ifs_samples
${CMAKE_CURRENT_BINARY_DIR}/memfs_gen
DEPENDS ${PROJECT_SOURCE_DIR}/memfs.py)
set_source_files_properties(

BIN
samples/wrap.tmpl Normal file

Binary file not shown.

View File

@ -436,10 +436,9 @@ endif()
ecbuild_add_library( TARGET eccodes
SOURCES grib_api_version.c
SOURCES ${CMAKE_CURRENT_BINARY_DIR}/grib_api_version.c
# griby.c gribl.c
${grib_api_srcs}
GENERATED grib_api_version.c
#PRIVATE_LIBS ${ECCODES_EXTRA_LIBRARIES} ${CMAKE_THREAD_LIBS_INIT} ${CMATH_LIBRARIES}
PRIVATE_INCLUDES "${AEC_INCLUDE_DIRS}"
PRIVATE_LIBS ${ECCODES_EXTRA_LIBRARIES} ${CMAKE_THREAD_LIBS_INIT} ${AEC_LIBRARIES} ${PNG_LIBRARIES}

View File

@ -269,6 +269,8 @@ static void dump(grib_action* act, FILE* f, int lvl)
static void xref(grib_action* act, FILE* f, const char* path)
{
Assert(!"xref is disabled");
#if 0
grib_action_alias* a = (grib_action_alias*)act;
if (a->target) {
fprintf(f, "bless({name=>'%s', target=>'%s', path=>'%s'},'xref::alias'),\n", act->name, a->target, path);
@ -280,6 +282,7 @@ static void xref(grib_action* act, FILE* f, const char* path)
if (act->name_space)
fprintf(f, "bless({name=>'%s.%s', path=>'%s'},'xref::unalias'),\n", act->name_space, act->name, path);
}
#endif
}
static void destroy(grib_context* context, grib_action* act)

View File

@ -131,6 +131,7 @@ static void dump(grib_action* act, FILE* f, int lvl)
grib_context_print(act->context, f, "%s[%d] %s \n", act->op, a->len, act->name);
}
#if 0
#define F(x) \
if (flg & x) { \
fprintf(f, "%s=>1,", #x); \
@ -176,6 +177,11 @@ static void xref(grib_action* act, FILE* f, const char* path)
fprintf(f, "]}, 'xref::%s'),\n", act->op);
}
#endif
static void xref(grib_action* act, FILE* f, const char* path)
{
Assert(!"xref is disabled");
}
static int create_accessor(grib_section* p, grib_action* act, grib_loader* loader)
{

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@ -407,7 +407,7 @@ bufr_descriptor* accessor_bufr_elements_table_get_descriptor(grib_accessor* a, i
v = (bufr_descriptor*)grib_context_malloc_clear(c, sizeof(bufr_descriptor));
if (!v) {
grib_context_log(c, GRIB_LOG_ERROR,
"grib_bufr_descriptor_new unable to allocate %ld bytes\n", sizeof(bufr_descriptor));
"accessor_bufr_elements_table_get_descriptor: unable to allocate %ld bytes\n", sizeof(bufr_descriptor));
*err = GRIB_OUT_OF_MEMORY;
return NULL;
}

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@ -216,6 +216,7 @@ static int global_depth = -1;
#endif
#define BUFR_DESCRIPTORS_ARRAY_USED_SIZE(v) ((v)->n)
#define SILENT 1
static void __expand(grib_accessor* a, bufr_descriptors_array* unexpanded, bufr_descriptors_array* expanded,
change_coding_params* ccp, int* err)
@ -273,7 +274,7 @@ static void __expand(grib_accessor* a, bufr_descriptors_array* unexpanded, bufr_
inner_unexpanded = grib_bufr_descriptors_array_new(c, DESC_SIZE_INIT, DESC_SIZE_INCR);
for (i = 0; i < size; i++) {
vv = grib_bufr_descriptor_new(self->tablesAccessor, v[i], err);
vv = grib_bufr_descriptor_new(self->tablesAccessor, v[i], !SILENT, err);
inner_unexpanded = grib_bufr_descriptors_array_push(inner_unexpanded, vv);
}
grib_context_free(c, v);
@ -396,7 +397,7 @@ static void __expand(grib_accessor* a, bufr_descriptors_array* unexpanded, bufr_
DESCRIPTORS_POP_FRONT_OR_RETURN(unexpanded, u);
size = 1;
if (ccp->associatedFieldWidth && u->X != 31) {
bufr_descriptor* au = grib_bufr_descriptor_new(self->tablesAccessor, 999999, err);
bufr_descriptor* au = grib_bufr_descriptor_new(self->tablesAccessor, 999999, !SILENT, err);
au->width = ccp->associatedFieldWidth;
grib_bufr_descriptor_set_scale(au, 0);
strcpy(au->shortName, "associatedField");
@ -658,8 +659,12 @@ static int expand(grib_accessor* a)
unexpanded_copy = grib_bufr_descriptors_array_new(c, unexpandedSize, DESC_SIZE_INCR);
operator206yyy_width = 0;
for (i = 0; i < unexpandedSize; i++) {
bufr_descriptor* aDescriptor1 = grib_bufr_descriptor_new(self->tablesAccessor, u[i], &err);
bufr_descriptor* aDescriptor2 = grib_bufr_descriptor_new(self->tablesAccessor, u[i], &err);
bufr_descriptor *aDescriptor1, *aDescriptor2;
/* ECC-1274: clear error and only issue msg once */
err = 0;
aDescriptor1 = grib_bufr_descriptor_new(self->tablesAccessor, u[i], SILENT, &err);
err = 0;
aDescriptor2 = grib_bufr_descriptor_new(self->tablesAccessor, u[i], !SILENT, &err);
/* ECC-433: Operator 206YYY */
if (aDescriptor1->F == 2 && aDescriptor1->X == 6) {

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@ -142,7 +142,6 @@ static void init(grib_accessor* a, const long l, grib_arguments* c)
a->flags |= GRIB_ACCESSOR_FLAG_READ_ONLY;
}
static void dump(grib_accessor* a, grib_dumper* dumper)
{
grib_dump_string(dumper, a, NULL);
@ -153,7 +152,6 @@ static int unpack_string(grib_accessor* a, char* val, size_t* len)
/* special clim case where each mont have 30 days.. to comply with mars*/
grib_accessor_g1day_of_the_year_date* self = (grib_accessor_g1day_of_the_year_date*)a;
char tmp[1024];
long year = 0;
@ -164,7 +162,6 @@ static int unpack_string(grib_accessor* a, char* val, size_t* len)
long fullyear = 0;
long fake_day_of_year = 0;
size_t l;
grib_get_long_internal(grib_handle_of_accessor(a), self->century, &century);
@ -175,7 +172,6 @@ static int unpack_string(grib_accessor* a, char* val, size_t* len)
if (*len < 1)
return GRIB_BUFFER_TOO_SMALL;
fullyear = ((century - 1) * 100 + year);
fake_day_of_year = ((month - 1) * 30) + day;
sprintf(tmp, "%04ld-%03ld", fullyear, fake_day_of_year);
@ -189,6 +185,5 @@ static int unpack_string(grib_accessor* a, char* val, size_t* len)
*len = l;
strcpy(val, tmp);
return GRIB_SUCCESS;
}

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@ -235,14 +235,14 @@ int pack_long_unsigned_helper(grib_accessor* a, const long* val, size_t* len, in
/* Check if value fits into number of bits */
if (check) {
const long nbits = self->nbytes * 8;
if (val[0] < 0) {
grib_context_log(a->context, GRIB_LOG_ERROR,
"Key \"%s\": Trying to encode a negative value of %ld for key of type unsigned\n", a->name, val[0]);
return GRIB_ENCODING_ERROR;
}
/* See GRIB-23 and GRIB-262 */
if (!value_is_missing(v)) {
if (v < 0) {
grib_context_log(a->context, GRIB_LOG_ERROR,
"Key \"%s\": Trying to encode a negative value of %ld for key of type unsigned\n", a->name, v);
return GRIB_ENCODING_ERROR;
}
const long nbits = self->nbytes * 8;
if (nbits < 33) {
unsigned long maxval = (1UL << nbits) - 1;
if (maxval > 0 && v > maxval) { /* See ECC-1002 */

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@ -171,7 +171,7 @@ grib_hash_array_value* grib_double_hash_array_value_new(grib_context* c, const c
void grib_hash_array_value_delete(grib_context* c, grib_hash_array_value* v);
/* grib_bufr_descriptor.c */
bufr_descriptor* grib_bufr_descriptor_new(grib_accessor* tables_accessor, int code, int* err);
bufr_descriptor* grib_bufr_descriptor_new(grib_accessor* tables_accessor, int code, int silent, int* err);
bufr_descriptor* grib_bufr_descriptor_clone(bufr_descriptor* d);
int grib_bufr_descriptor_set_code(grib_accessor* tables_accessor, int code, bufr_descriptor* v);
void grib_bufr_descriptor_set_reference(bufr_descriptor* v, long reference);
@ -743,7 +743,6 @@ char* grib_get_field_file(grib_index* index, off_t* offset);
grib_handle* grib_handle_new_from_index(grib_index* index, int* err);
grib_handle* codes_new_from_index(grib_index* index, int message_type, int* err);
void grib_index_rewind(grib_index* index);
int grib_index_search(grib_index* index, grib_index_key* keys);
int codes_index_set_product_kind(grib_index* index, ProductKind product_kind);
int codes_index_set_unpack_bufr(grib_index* index, int unpack);
int is_index_file(const char* filename);

View File

@ -420,7 +420,7 @@ int grib_encode_size_tb(unsigned char* p, size_t val, long* bitp, long nb)
#if OMP_PACKING
#include "grib_bits_any_endian_omp.c"
#elif VECTOR
#include "grib_bits_any_endian_vector.c"
#include "grib_bits_any_endian_vector.c" /* Experimental */
#else
#include "grib_bits_any_endian_simple.c"
#endif

View File

@ -11,10 +11,10 @@
#include "grib_api_internal.h"
bufr_descriptor* grib_bufr_descriptor_new(grib_accessor* tables_accessor, int code, int* err)
bufr_descriptor* grib_bufr_descriptor_new(grib_accessor* tables_accessor, int code, int silent, int* err)
{
bufr_descriptor* ret = accessor_bufr_elements_table_get_descriptor(tables_accessor, code, err);
if (*err)
if (!silent && *err)
grib_context_log(tables_accessor->context, GRIB_LOG_ERROR,
"unable to get descriptor %06d from table", code);
return ret;

View File

@ -423,6 +423,7 @@ int grib_fieldset_apply_where(grib_fieldset* set, const char* where_string)
print_math(m);
printf("\n");
grib_math_delete(set->context, m);
return err;
}

View File

@ -193,6 +193,7 @@ static grib_math* readatom(grib_context* c, char** form, int* err)
p->name = strdup(buf);
Assert(p->name);
p->left = 0;
p->right = 0;
switch (**form) {
case '(':
@ -252,9 +253,9 @@ static grib_math* readpower(grib_context* c, char** form, int* err)
{
grib_math* p = readatom(c, form, err);
while (**form == '^' || (**form == '*' && *(*form + 1) == '*')) {
grib_math* q = (grib_math*)grib_context_malloc(c, sizeof(grib_math));
q->right = 0;
q->left = p;
q->arity = 2;

View File

@ -1921,6 +1921,7 @@ void grib_index_rewind(grib_index* index)
index->rewind = 1;
}
#if 0
static grib_index_key* search_key(grib_index_key* keys, grib_index_key* to_search)
{
if (!keys || !strcmp(keys->name, to_search->name))
@ -1947,6 +1948,7 @@ int grib_index_search(grib_index* index, grib_index_key* keys)
grib_index_rewind(index);
return 0;
}
#endif
int codes_index_set_product_kind(grib_index* index, ProductKind product_kind)
{

View File

@ -100,11 +100,13 @@ if( HAVE_BUILD_TOOLS )
grib_sh_imag
grib_sh_spectral_complex
pseudo_diag
wrap
grib_levtype
grib_grid_unstructured
grib_grid_lambert_conformal
grib_grid_polar_stereographic
grib_g1monthlydate
grib_g1day_of_the_year_date
grib_g1fcperiod)
# These tests do require data downloads

View File

@ -23,7 +23,15 @@ for file in $ECCODES_SAMPLES_PATH/BUFR*.tmpl; do
done
# Check one specific BUFR file dump output
${tools_dir}/bufr_dump -p $ECCODES_SAMPLES_PATH/BUFR3.tmpl > $temp
input=$ECCODES_SAMPLES_PATH/BUFR3.tmpl
${tools_dir}/bufr_dump -p $input > $temp
diff ${data_dir}/BUFR3.tmpl.dump.plain.ref $temp
# Code generation
input=$ECCODES_SAMPLES_PATH/BUFR4.tmpl
for lang in C python fortran filter; do
${tools_dir}/bufr_dump -D $lang $input >/dev/null
${tools_dir}/bufr_dump -E $lang $input >/dev/null
done
rm -f $temp

View File

@ -92,6 +92,9 @@ input=${data_dir}/spherical_model_level.grib1
${tools_dir}/grib_set -r -s packingType=spectral_simple $input $temp
grib_check_key_equals $temp packingType 'spectral_simple'
${tools_dir}/grib_ls -p numberOfCodedValues $temp
${tools_dir}/grib_ls -n statistics $temp
stats=`${tools_dir}/grib_get -F%.1f -p average,standardDeviation $temp`
[ "$stats" = "195.1 12.0" ]
rm -f $temp

View File

@ -189,6 +189,17 @@ sample1=$ECCODES_SAMPLES_PATH/sh_ml_grib1.tmpl
padding=`echo 'print "[padding_grid50_1]";' | ${tools_dir}/grib_filter - $sample1`
[ "$padding" = "000000000000000000000000000000000000" ]
echo "Test switch statement"
# --------------------------
cat >temp.filt <<EOF
switch (edition) {
case 1: print "1";
case 2: print "2";
default: print "what is this?";assert(0);
}
EOF
${tools_dir}/grib_filter temp.filt $ECCODES_SAMPLES_PATH/GRIB1.tmpl $ECCODES_SAMPLES_PATH/GRIB2.tmpl
# Clean up
rm -f temp_filt.grib2 temp.filt

View File

@ -0,0 +1,25 @@
#!/bin/sh
# (C) Copyright 2005- ECMWF.
#
# This software is licensed under the terms of the Apache Licence Version 2.0
# which can be obtained at http://www.apache.org/licenses/LICENSE-2.0.
#
# In applying this licence, ECMWF does not waive the privileges and immunities granted to it by
# virtue of its status as an intergovernmental organisation nor does it submit to any jurisdiction.
#
. ./include.sh
label="grib_g1day_of_the_year_date"
sample_g1=$ECCODES_SAMPLES_PATH/GRIB1.tmpl
temp=temp.$label.grib
${tools_dir}/grib_set -s marsType=s3,marsStream=mpic $sample_g1 $temp
grib_check_key_equals $temp "mars.date:s,dayOfTheYearDate:s" "2006-076 2006-076"
${tools_dir}/grib_set -s marsType=s3,marsStream=ukmo $sample_g1 $temp
grib_check_key_equals $temp "mars.date:s,dayOfTheYearDate:s" "2006-076 2006-076"
# Clean up
rm -f $temp

View File

@ -9,6 +9,8 @@
#
. ./include.sh
set -u
temp=temp.grib_iterator.grib
files="reduced_latlon_surface.grib1 \
reduced_gaussian_pressure_level.grib1 \
@ -32,3 +34,7 @@ done
# ECC-822: Increase lat/lon decimals using default grib_get_data
${tools_dir}/grib_get_data -L%12.6f%11.5f ${data_dir}/regular_latlon_surface.grib2
${tools_dir}/grib_get_data -p shortName,level ${data_dir}/regular_latlon_surface.grib2 > $temp
grep -q "Latitude Longitude Value shortName level" $temp
rm -f $temp

View File

@ -12,12 +12,15 @@
#set -x
REDIRECT=/dev/null
sample_g1=$ECCODES_SAMPLES_PATH/reduced_gg_pl_640_grib1.tmpl
sample_g2=$ECCODES_SAMPLES_PATH/reduced_gg_pl_640_grib2.tmpl
cd ${data_dir}
rm -f local.log
# Check all GRIB2 local def files and definitions/grib2/grib2LocalSectionNumber.98.table
# Each number should appear in the table
# -----------------------------------------
g2lds=${ECCODES_DEFINITION_PATH}/grib2/local.98.*.def
for g2ld in $g2lds; do
bname=`basename $g2ld`
@ -25,11 +28,20 @@ for g2ld in $g2lds; do
grep -q "^$dnum" ${ECCODES_DEFINITION_PATH}/grib2/grib2LocalSectionNumber.98.table
done
# Use of subCentre=98 for other centre GRIBs
# ------------------------------------------
temp=temp.grib_local.grib
${tools_dir}/grib_set -s centre=edzw,subCentre=98,setLocalDefinition=1,localDefinitionNumber=1 \
$ECCODES_SAMPLES_PATH/GRIB2.tmpl $temp
grib_check_key_equals $temp section2Length,centre,expver,marsClass:i,marsType:i,marsStream:i "17 edzw 0001 1 2 1025"
rm -f $temp
${tools_dir}/grib_set -s edition=2,setLocalDefinition=1 reduced_gaussian_model_level.grib1 loc.grib2
${tools_dir}/grib_set -s setLocalDefinition=1 reduced_gaussian_model_level.grib1 loc.grib1
# conversion 1->2
# Conversion 1->2
# ----------------
for localDefinitionNumber in 1 15 26 30
do
${tools_dir}/grib_set -s localDefinitionNumber=$localDefinitionNumber,perturbationNumber=2,numberOfForecastsInEnsemble=50 loc.grib1 eps.grib1
@ -45,7 +57,8 @@ do
${tools_dir}/grib_compare -e -b param eps.grib1 eps.grib2
done
#local -> local
# Local -> local
# ---------------
for localStart in 1 7 9 20 25 26 30
do
${tools_dir}/grib_set -s localDefinitionNumber=$localStart loc.grib1 loc1.grib1
@ -60,7 +73,8 @@ do
done
done
#special types/streams
# Special types/streams
# ----------------------
${tools_dir}/grib_set -s localDefinitionNumber=1,numberOfForecastsInEnsemble=0 loc.grib1 loc1.grib1
${tools_dir}/grib_set -s edition=2 loc1.grib1 loc1.grib2
${tools_dir}/grib_get -f -p localDefinitionNumber,perturbationNumber loc1.grib2 >> local.log
@ -78,8 +92,6 @@ rm -f local.log loc.grib1 loc.grib2 loc1.grib1 loc1.grib2 eps.grib1 eps.grib2
# Delete Local Definition
# -----------------------
sample_g1=$ECCODES_SAMPLES_PATH/reduced_gg_pl_640_grib1.tmpl
sample_g2=$ECCODES_SAMPLES_PATH/reduced_gg_pl_640_grib2.tmpl
temp=temp.grib_local.grib
grib_check_key_equals $sample_g1 localUsePresent 1
${tools_dir}/grib_set -s deleteLocalDefinition=1 $sample_g1 $temp
@ -105,8 +117,16 @@ grib_check_key_equals $temp section2Length 5
rm -f $temp
# Local Definition 5
# -----------------------
# Local Definition 4: Ocean model data
# ---------------------------------------
${tools_dir}/grib_set -s \
localDefinitionNumber=4,coordinate2Flag=2,averaging1Flag=1,coordinate1Flag=1,coordinate2Start=1234 \
$sample_g1 $temp
grib_check_key_equals $temp "mars.levelist,roundedMarsLevelist:d,roundedMarsLevelist:s" "1 1.234 1.234"
# Local Definition 5: Forecast probability data
# ---------------------------------------------
sample_g1=$ECCODES_SAMPLES_PATH/GRIB1.tmpl
temp=temp.grib_local.grib
${tools_dir}/grib_set -s setLocalDefinition=1,localDefinitionNumber=5 $sample_g1 $temp.1
@ -169,4 +189,5 @@ result=`echo 'print "[ccccIdentifiers]";' | ${tools_dir}/grib_filter - $temp`
[ "$result" = "kwbc ecmf sabm" ]
rm -f $temp $temp.1 $temp.2 $temp.3

View File

@ -21,6 +21,8 @@
#include "eccodes.h"
int grib_fieldset_apply_where(grib_fieldset* set, const char* where_string); /*experimental*/
static void usage(const char* prog)
{
printf("Usage: %s [-n] grib_file grib_file ...\n", prog);
@ -72,6 +74,10 @@ int main(int argc, char** argv)
set = codes_fieldset_new_from_files(0, filenames, nfiles, 0, 0, 0, order_by, &err);
CODES_CHECK(err, 0);
/* grib_fieldset_apply_where not fully implemented*/
err=grib_fieldset_apply_where(set, "(centre=='ecmf') && number==1 || step==6");
CODES_CHECK(err, 0);
printf("ordering by %s\n", order_by);
printf("%d fields in the fieldset\n", codes_fieldset_count(set));
printf("n,step,param\n");

View File

@ -19,6 +19,7 @@ input_grb=${data_dir}/reduced_gaussian_pressure_level.grib1
# --------------------------------------
$EXEC ${test_dir}/grib_nearest_test $input_grb > $temp
cat > $tempRef <<EOF
((((centre)==(ecmf))&&((number)==(1)))||((step)==(6)))
ordering by param,step
1 fields in the fieldset
n,step,param
@ -36,6 +37,7 @@ diff $tempRef $temp
# ----------------------------------------
$EXEC ${test_dir}/grib_nearest_test -n $input_grb > $temp
cat > $tempRef <<EOF
((((centre)==(ecmf))&&((number)==(1)))||((step)==(6)))
ordering by param,step
1 fields in the fieldset
n,step,param

View File

@ -13,7 +13,8 @@
REDIRECT=/dev/null
infile=${data_dir}/regular_gaussian_surface.grib1
outfile=${data_dir}/set.grib1
outfile=${data_dir}/temp.grib_set.grib
temp=temp.grib_set.out
rm -f $outfile
@ -52,13 +53,37 @@ centre=`${tools_dir}/grib_get -p centre $outfile`
centre=`${tools_dir}/grib_get -p centre:l $outfile`
[ $centre -eq 80 ]
# Set without -s. Expected to fail
# ----------------------------------------------------
set +e
# This is expected to fail
${tools_dir}/grib_set -p levtype $infile $outfile 2> $REDIRECT > $REDIRECT
[ $? -ne 0 ]
status=$?
set -e
[ $status -ne 0 ]
# GRIB-941: encoding of grib2 angles
# Out-of-bounds value. Expected to fail
# ----------------------------------------------------
input=${data_dir}/reduced_gaussian_sub_area.grib2
set +e
${tools_dir}/grib_set -s perturbationNumber=1000 $input $outfile 2>$temp
status=$?
set -e
[ $status -ne 0 ]
grep -q "Trying to encode value of 1000 but the maximum allowable value is 255 (number of bits=8)" $temp
# Negative value for an unsigned key. Expected to fail
# ----------------------------------------------------
input=${data_dir}/reduced_gaussian_sub_area.grib2
set +e
${tools_dir}/grib_set -s perturbationNumber=-1 $input $outfile 2>$temp
status=$?
set -e
[ $status -ne 0 ]
grep -q "Trying to encode a negative value of -1 for key of type unsigned" $temp
# GRIB-941: encoding of GRIB2 angles
# -----------------------------------
angleInDegrees=130.9989
angleInMicroDegrees=130998900
files="GRIB2.tmpl regular_gg_pl_grib2.tmpl reduced_gg_pl_320_grib2.tmpl polar_stereographic_pl_grib2.tmpl"
@ -69,14 +94,17 @@ for f in $files; do
done
# GRIB-943: centre code table
# ----------------------------
${tools_dir}/grib_set -s centre=289 $ECCODES_SAMPLES_PATH/GRIB2.tmpl $outfile
${tools_dir}/grib_dump -O $outfile | grep -q 'centre = 289.*Zambia'
# ECC-539: avoid output being the same as input
# -----------------------------------------------
set +e
${tools_dir}/grib_set -s centre=0 $outfile $outfile
status=$?
set -e
[ $status -ne 0 ]
rm -f $outfile
rm -f $outfile $temp

View File

@ -33,6 +33,8 @@ tempGrib=temp.${label}.grib
tempNetcdf=temp.${label}.nc
tempText=temp.${label}.txt
have_netcdf4=0
# Do we have ncdump?
NC_DUMPER=""
if command -v "ncdump" >/dev/null 2>&1; then
@ -51,6 +53,22 @@ if test "x$NC_DUMPER" != "x"; then
grep -q "short tp_0001" $tempText
fi
if [ $ECCODES_ON_WINDOWS -eq 0 ]; then
echo "Test HDF5 decoding ..."
# ---------------------------
# Note: this is only available in NetCDF-4. So need to check if the command worked with -k3
input=${data_dir}/sample.grib2
set +e
${tools_dir}/grib_to_netcdf -k3 -o $tempNetcdf $input 2>/dev/null
stat=$?
set -e
if [ $stat -eq 0 ]; then
have_netcdf4=1
${tools_dir}/grib_dump -TA -O $tempNetcdf
res=`${tools_dir}/grib_get -TA -p identifier $tempNetcdf`
[ "$res" = "HDF5" ]
fi
fi
grib_files="\
regular_latlon_surface.grib2 \
@ -72,14 +90,22 @@ for dt in $ncf_types; do
done
done
echo "Test creating different kinds; netcdf3 classic and large ..."
echo "Test creating different kinds ..."
# ------------------------------------------------------------------
# TODO: enable tests for netcdf4 formats too
input=${data_dir}/regular_latlon_surface.grib2
${tools_dir}/grib_to_netcdf -k 1 -o $tempNetcdf $input >/dev/null
${tools_dir}/grib_to_netcdf -k 2 -o $tempNetcdf $input >/dev/null
#${tools_dir}/grib_to_netcdf -k 3 -o $tempNetcdf $input >/dev/null
#${tools_dir}/grib_to_netcdf -k 4 -o $tempNetcdf $input >/dev/null
if [ $have_netcdf4 -eq 1 ]; then
${tools_dir}/grib_to_netcdf -k 3 -o $tempNetcdf $input >/dev/null
${tools_dir}/grib_to_netcdf -k 4 -o $tempNetcdf $input >/dev/null
fi
echo "Test shuffle and deflate ..."
# ---------------------------------
if [ $have_netcdf4 -eq 1 ]; then
input=${data_dir}/sst_globus0083.grib
${tools_dir}/grib_to_netcdf -s -d9 -k4 -o $tempNetcdf $input
fi
echo "Test ECC-1060 ..."
# ----------------------

View File

@ -15,6 +15,7 @@ label="pseudo_budg_test"
set -u
tempOut=temp.$label.txt
tempRef=temp.$label.ref
tempBud=temp.$label.bud
${tools_dir}/grib_ls -j ${data_dir}/budg > $tempOut
cat > $tempRef << EOF
@ -31,7 +32,20 @@ cat > $tempRef << EOF
EOF
diff $tempRef $tempOut
# Set date
${tools_dir}/grib_set -s date=20170102 ${data_dir}/budg $tempBud
res=`${tools_dir}/grib_get -p mars.date $tempBud`
[ "$res" = "20170102" ]
${tools_dir}/grib_dump ${data_dir}/budg
${tools_dir}/grib_dump -O ${data_dir}/budg
rm -f $tempRef $tempOut
ms=`${tools_dir}/grib_get -p mars.step ${data_dir}/budg`
[ "$ms" = "0" ]
${tools_dir}/grib_set -s mars.step=19 ${data_dir}/budg $tempOut
${tools_dir}/grib_ls -jm $tempOut
ms=`${tools_dir}/grib_get -p mars.step $tempOut`
[ "$ms" = "19" ]
rm -f $tempRef $tempOut $tempBud

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@ -1,4 +1,4 @@
# bashrc to be used for running tests on windows.
# bashrc to be used for running tests on Microsoft Windows.
# In order for the functions to be usable by the tests, we need to use the -i option.
# Typical usage:
# bash --rcfile windows_testing.bashrc -ci "some/test/script.sh"

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@ -8,15 +8,22 @@
# virtue of its status as an intergovernmental organisation nor does it submit to any jurisdiction.
#
# Tests for WRAP
. ./include.sh
label="wrap-test"
tempOut=temp.${label}.out
tempTxt=temp.${label}.txt
tempRef=temp.${label}.ref
REDIRECT=/dev/null
cat >${data_dir}/f.rules <<EOF
set values = { 1.0e-110, 1.5e-110, 1.005e-110 }
write;
EOF
input=$ECCODES_SAMPLES_PATH/wrap.tmpl
${tools_dir}/grib_filter ${data_dir}/f.rules ${data_dir}/ 2> $REDIRECT > $REDIRECT
${tools_dir}/grib_dump -TA -O $input
id=`${tools_dir}/grib_get -TA -p identifier $input`
[ "$id" = "WRAP" ]
# Clean up
rm -f $tempOut $tempRef $tempTxt

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@ -208,7 +208,7 @@ int grib_tool_new_handle_action(grib_runtime_options* options, grib_handle* h)
if (print_keys)
for (i = 0; i < options->print_keys_count; i++)
fprintf(dump_file, ", %s", options->print_keys[i].name);
fprintf(dump_file, " %s", options->print_keys[i].name);
fprintf(dump_file, "\n");

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@ -3,7 +3,7 @@ PACKAGE_NAME='eccodes'
# Package version
ECCODES_MAJOR_VERSION=2
ECCODES_MINOR_VERSION=23
ECCODES_MINOR_VERSION=24
ECCODES_REVISION_VERSION=0
ECCODES_CURRENT=1