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Merge branch 'eccodes' of ssh://software.ecmwf.int:7999/GRIB/grib_api into eccodes

This commit is contained in:
Shahram Najm 2014-10-20 17:08:10 +01:00
parent 5c38750b9e 51a5418b9a
commit 913a6b928c
1 changed files with 55 additions and 25 deletions
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80
src/grib_accessor_class_bufr_data_array.c
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@ -47,7 +47,8 @@
MEMBERS = grib_vsarray* stringValues
MEMBERS = grib_viarray* elementsDescriptorsIndex
MEMBERS = int do_decode
MEMBERS = int bitmapStartReferredDescriptorsIndex
MEMBERS = int bitmapStartElementsDescriptorsIndex
MEMBERS = int bitmapCurrentElementsDescriptorsIndex
MEMBERS = int bitmapSize
MEMBERS = int bitmapStart
MEMBERS = int bitmapCurrent
@ -107,7 +108,8 @@ typedef struct grib_accessor_bufr_data_array {
grib_vsarray* stringValues;
grib_viarray* elementsDescriptorsIndex;
int do_decode;
int bitmapStartReferredDescriptorsIndex;
int bitmapStartElementsDescriptorsIndex;
int bitmapCurrentElementsDescriptorsIndex;
int bitmapSize;
int bitmapStart;
int bitmapCurrent;
@ -193,7 +195,10 @@ static int can_be_missing(int descriptor) {
return ret;
}
static void restart_bitmap(grib_accessor_bufr_data_array *self) { self->bitmapCurrent=-1; }
static void restart_bitmap(grib_accessor_bufr_data_array *self) {
self->bitmapCurrent=-1;
self->bitmapCurrentElementsDescriptorsIndex=self->bitmapStartElementsDescriptorsIndex-1;
}
static void cancel_bitmap(grib_accessor_bufr_data_array *self) { self->bitmapCurrent=-1;self->bitmapStart=-1; }
@ -422,7 +427,7 @@ static void decode_element(grib_context* c,grib_accessor_bufr_data_array* self,
unsigned char* data,long *pos,int i,grib_darray* dval,grib_sarray* sval) {
grib_darray* dar=0;
grib_sarray* sar=0;
int index=0,ii,idx,sar_size;
int index=0,ii,sar_size;
char* csval=0;
double cdval=0,x;
if (self->expanded->v[i]->flags & BUFR_DESCRIPTOR_FLAG_IS_STRING) {
@ -433,11 +438,11 @@ static void decode_element(grib_context* c,grib_accessor_bufr_data_array* self,
index=grib_vsarray_used_size(self->stringValues);
dar=grib_darray_new(c,self->numberOfDataSubsets,10);
sar_size=grib_sarray_used_size(sar);
for (ii=0;ii<self->numberOfDataSubsets;ii++) {
idx = sar_size==1 ? 0 : ii;
x=index*1000+strlen(sar->v[idx]);
index=self->numberOfDataSubsets*(index-1);
for (ii=1;ii<=self->numberOfDataSubsets;ii++) {
x=(index+ii)*1000+self->expanded->v[i]->width/8;
/* x=index*1000+strlen(sar->v[idx]); */
grib_darray_push(c,dar,x);
index++;
}
grib_vdarray_push(c,self->numericValues,dar);
} else {
@ -459,20 +464,21 @@ static void decode_element(grib_context* c,grib_accessor_bufr_data_array* self,
}
}
static int build_bitmap(grib_accessor_bufr_data_array *self,unsigned char* data,long* pos,int iBitmapOperator) {
static int build_bitmap(grib_accessor_bufr_data_array *self,unsigned char* data,long* pos,grib_iarray* elementsDescriptorsIndex,int iBitmapOperator) {
int bitmapSize,iDelayedReplication=0;
int i,localReference,width,bitmapEndReferredDescriptorsIndex;
long ppos;
int i,localReference,width,bitmapEndElementsDescriptorsIndex;
long ppos,n;
grib_accessor* a=(grib_accessor*)self;
grib_context* c=a->parent->h->context;
bufr_descriptor** descriptors=self->expanded->v;
long* edi=elementsDescriptorsIndex->v;
int iel=grib_iarray_used_size(elementsDescriptorsIndex)-1;
switch (descriptors[iBitmapOperator]->code) {
case 236000:
cancel_bitmap(self);
i=iBitmapOperator;
/* while (descriptors[i]->code>200000) i--; */
bitmapEndReferredDescriptorsIndex=i-1;
while (descriptors[edi[iel]]->code>=100000) iel--;
bitmapEndElementsDescriptorsIndex=iel;
i=iBitmapOperator+1;
if (descriptors[i]->code==101000) {
iDelayedReplication=iBitmapOperator+2;
@ -500,7 +506,13 @@ static int build_bitmap(grib_accessor_bufr_data_array *self,unsigned char* data,
bitmapSize=0;
while (descriptors[i]->code==31031) {bitmapSize++;i++;}
}
self->bitmapStartReferredDescriptorsIndex=bitmapEndReferredDescriptorsIndex-bitmapSize+1;
iel=bitmapEndElementsDescriptorsIndex;
n=bitmapSize-1;
while ( n>0 && iel>=0 ) {
if (descriptors[edi[iel]]->code<100000) n--;
iel--;
}
self->bitmapStartElementsDescriptorsIndex=iel;
restart_bitmap(self);
break;
default :
@ -511,18 +523,36 @@ static int build_bitmap(grib_accessor_bufr_data_array *self,unsigned char* data,
return GRIB_SUCCESS;
}
static int get_next_bitmap_descriptor_index(grib_accessor_bufr_data_array *self,int isubset) {
/* isubset is not used for compressed data*/
int ret,i;
static int get_next_bitmap_descriptor_index(grib_accessor_bufr_data_array *self,grib_iarray* elementsDescriptorsIndex,grib_darray* numericValues) {
int i;
bufr_descriptor** descriptors=self->expanded->v;
self->bitmapCurrent++;
self->bitmapCurrentElementsDescriptorsIndex++;
i=self->bitmapCurrent+self->bitmapStart;
if (self->compressedData) {
while (self->numericValues->v[i]->v[0]==1) {self->bitmapCurrent++;i++;}
while (self->numericValues->v[i]->v[0]==1) {
self->bitmapCurrent++;
self->bitmapCurrentElementsDescriptorsIndex++;
while (descriptors[elementsDescriptorsIndex->v[self->bitmapCurrentElementsDescriptorsIndex]]->code
>100000)
self->bitmapCurrentElementsDescriptorsIndex++;
i++;
}
} else {
while (self->numericValues->v[isubset]->v[i]==1) {self->bitmapCurrent++;i++;}
while (numericValues->v[i]==1) {
self->bitmapCurrent++;
self->bitmapCurrentElementsDescriptorsIndex++;
while (descriptors[elementsDescriptorsIndex->v[self->bitmapCurrentElementsDescriptorsIndex]]->code
>100000)
self->bitmapCurrentElementsDescriptorsIndex++;
i++;
}
}
ret=self->bitmapStartReferredDescriptorsIndex+self->bitmapCurrent;
return ret;
while (descriptors[elementsDescriptorsIndex->v[self->bitmapCurrentElementsDescriptorsIndex]]->code
>100000)
self->bitmapCurrentElementsDescriptorsIndex++;
return elementsDescriptorsIndex->v[self->bitmapCurrentElementsDescriptorsIndex];
}
static void push_zero_element(grib_accessor_bufr_data_array* self,grib_darray* dval) {
@ -601,7 +631,7 @@ static int decode_elements(grib_accessor* a) {
/* Table B element */
grib_iarray_push(elementsDescriptorsIndex,i);
if (descriptors[i]->code==31031 && !is_bitmap_start_defined(self))
self->bitmapStart=grib_iarray_used_size(elementsDescriptorsIndex);
self->bitmapStart=grib_iarray_used_size(elementsDescriptorsIndex)-1;
decode_element(c,self,data,&pos,i,dval,sval);
break;
case 1:
@ -662,7 +692,7 @@ static int decode_elements(grib_accessor* a) {
case 32:
/*replaced/retained values marker operator*/
if (descriptors[i]->Y==255) {
index=get_next_bitmap_descriptor_index(self,iss);
index=get_next_bitmap_descriptor_index(self,elementsDescriptorsIndex,dval);
decode_element(c,self,data,&pos,index,dval,sval);
grib_iarray_push(elementsDescriptorsIndex,index);
} else {
@ -683,7 +713,7 @@ static int decode_elements(grib_accessor* a) {
/* bitmap */
grib_iarray_push(elementsDescriptorsIndex,i);
push_zero_element(self,dval);
build_bitmap(self,data,&pos,i);
build_bitmap(self,data,&pos,elementsDescriptorsIndex,i);
break;
case 37:
/* reuse defined bitmap */