eccodes/src/grib_parse_utils.c

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/*
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* Copyright 2005-2017 ECMWF.
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*
* This software is licensed under the terms of the Apache Licence Version 2.0
* which can be obtained at http://www.apache.org/licenses/LICENSE-2.0.
*
* In applying this licence, ECMWF does not waive the privileges and immunities granted to it by
* virtue of its status as an intergovernmental organisation nor does it submit to any jurisdiction.
*/
/***************************************************************************
* Jean Baptiste Filippi - 01.11.2005 *
* Enrico Fucile
* *
***************************************************************************/
#include "grib_api_internal.h"
grib_action* grib_parser_all_actions = 0;
grib_context* grib_parser_context = 0;
grib_concept_value* grib_parser_concept = 0;
grib_hash_array_value* grib_parser_hash_array = 0;
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grib_rule* grib_parser_rules = 0;
extern FILE* grib_yyin;
extern int grib_yydebug;
static const char* parse_file = 0;
#if GRIB_PTHREADS
static pthread_once_t once = PTHREAD_ONCE_INIT;
static pthread_mutex_t mutex_file = PTHREAD_MUTEX_INITIALIZER;
static pthread_mutex_t mutex_rules = PTHREAD_MUTEX_INITIALIZER;
static pthread_mutex_t mutex_concept = PTHREAD_MUTEX_INITIALIZER;
static pthread_mutex_t mutex_hash_array = PTHREAD_MUTEX_INITIALIZER;
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static pthread_mutex_t mutex_stream = PTHREAD_MUTEX_INITIALIZER;
static pthread_mutex_t mutex_parse = PTHREAD_MUTEX_INITIALIZER;
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static void init()
{
pthread_mutexattr_t attr;
pthread_mutexattr_init(&attr);
pthread_mutexattr_settype(&attr,PTHREAD_MUTEX_RECURSIVE);
pthread_mutex_init(&mutex_file,&attr);
pthread_mutex_init(&mutex_rules,&attr);
pthread_mutex_init(&mutex_concept,&attr);
pthread_mutex_init(&mutex_hash_array,&attr);
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pthread_mutex_init(&mutex_stream,&attr);
pthread_mutex_init(&mutex_parse,&attr);
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pthread_mutexattr_destroy(&attr);
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}
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#elif GRIB_OMP_THREADS
static int once = 0;
static omp_nest_lock_t mutex_file;
static omp_nest_lock_t mutex_rules;
static omp_nest_lock_t mutex_concept;
static omp_nest_lock_t mutex_hash_array;
static omp_nest_lock_t mutex_stream;
static omp_nest_lock_t mutex_parse;
static void init()
{
GRIB_OMP_CRITICAL(lock_grib_parse_utils_c)
{
if (once == 0)
{
omp_init_nest_lock(&mutex_file);
omp_init_nest_lock(&mutex_rules);
omp_init_nest_lock(&mutex_concept);
omp_init_nest_lock(&mutex_hash_array);
omp_init_nest_lock(&mutex_stream);
omp_init_nest_lock(&mutex_parse);
once = 1;
}
}
}
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#endif
int grib_recompose_name(grib_handle* h, grib_accessor *observer, const char* uname, char* fname, int fail)
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{
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grib_accessor* a;
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char loc[1024]={0,};
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int i = 0;
int ret = 0;
int mode = -1;
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char val[1024]={0,};
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double dval=0;
long lval=0;
int type=GRIB_TYPE_STRING;
size_t replen = 0;
const size_t uname_len = strlen(uname);
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loc[0] = 0 ;
fname[0] = 0 ;
for(i=0; i<uname_len; i++)
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{
if(mode > -1)
{
if(uname[i] == ':') {
type=grib_type_to_int(uname[i+1]);
i++;
} else if(uname[i] == ']')
{
loc[mode] = 0;
mode = -1;
a = grib_find_accessor(h,loc);
if(!a){
if (!fail) {
sprintf(val,"undef");
} else {
grib_context_log(h->context, GRIB_LOG_WARNING,"grib_recompose_name: Problem to recompose filename with : %s ( %s no accessor found)", uname,loc);
return GRIB_NOT_FOUND;
}
} else {
switch (type) {
case GRIB_TYPE_STRING:
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replen = 1024;
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ret = grib_unpack_string(a,val,&replen);
break;
case GRIB_TYPE_DOUBLE:
replen=1;
ret = grib_unpack_double(a,&dval,&replen);
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sprintf(val,"%.12g",dval);
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break;
case GRIB_TYPE_LONG:
replen=1;
ret = grib_unpack_long(a,&lval,&replen);
sprintf(val,"%d",(int)lval);
break;
default:
grib_context_log(h->context, GRIB_LOG_WARNING,"grib_recompose_name: Problem to recompose filename with : %s, invalid type %d", loc,type);
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break;
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}
grib_dependency_add(observer,a);
if((ret != GRIB_SUCCESS))
{
grib_context_log(h->context, GRIB_LOG_ERROR,"grib_recompose_name: Could not recompose filename : %s", uname);
return ret;
}
}
{
char* pc=fname;
while (*pc != '\0') pc++;
strcpy(pc,val);
}
/* sprintf(fname,"%s%s",fname,val); */
loc[0] = 0 ;
}
else
loc[mode++]=uname[i];
}
else if(uname[i]=='[')
mode = 0;
else {
int llen=strlen(fname);
fname[llen]=uname[i];
fname[llen+1]='\0';
/* sprintf(fname,"%s%c",fname, uname[i]); */
type=GRIB_TYPE_STRING;
}
}
/*fprintf(stdout,"parsed > %s\n",fname);*/
return GRIB_SUCCESS;
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}
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int grib_accessor_print(grib_accessor* a,const char* name,int type,const char* format,const char* separator,int maxcols,int* newline,FILE* out)
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{
size_t size=0;
char* sval=NULL;
char* p=NULL;
double* dval=0;
long* lval=0;
char sbuf[1024]={0,};
size_t replen = 0;
int ret=0;
char* myformat=NULL;
char* myseparator=NULL;
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char double_format[]="%.12g"; /* default format for printing double keys */
char long_format[]="%ld"; /* default format for printing integer keys */
char default_separator[]=" ";
grib_handle* h=grib_handle_of_accessor(a);
if (type==-1) type=grib_accessor_get_native_type(a);
switch (type) {
case GRIB_TYPE_STRING:
replen=sizeof(sbuf)/sizeof(*sbuf);
ret = grib_unpack_string(a,sbuf,&replen);
fprintf(out,"%s",sbuf);
break;
case GRIB_TYPE_DOUBLE:
myformat= format ? (char*)format : double_format;
myseparator= separator ? (char*)separator : default_separator;
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if (name[0]=='/' || name[0]=='#') {
long count;
ret=grib_value_count(a,&count);
size=count;
} else {
ret=_grib_get_size(h,a,&size);
}
dval=(double*)grib_context_malloc_clear(h->context,sizeof(double)*size);
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if (name[0]=='/' || name[0]=='#') {
replen=size;
ret=grib_unpack_double(a,dval,&replen);
} else {
replen=0;
ret=_grib_get_double_array_internal(h,a,dval,size,&replen);
}
if (replen==1) fprintf(out,myformat,dval[0]);
else {
int i=0;
int cols=0;
for (i=0;i<replen;i++) {
*newline=1;
fprintf(out,myformat,dval[i]);
if (i<replen-1) fprintf(out, "%s", myseparator);
cols++;
if (cols>=maxcols) {
fprintf(out,"\n");
*newline=1;
cols=0;
}
}
}
grib_context_free( h->context,dval);
break;
case GRIB_TYPE_LONG:
myformat= format ? (char*)format : long_format;
myseparator= separator ? (char*)separator : default_separator;
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if (name[0]=='/' || name[0]=='#') {
long count;
ret=grib_value_count(a,&count);
size=count;
} else {
ret=_grib_get_size(h,a,&size);
}
lval=(long*)grib_context_malloc_clear(h->context,sizeof(long)*size);
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if (name[0]=='/' || name[0]=='#') {
replen=size;
ret=grib_unpack_long(a,lval,&replen);
} else {
replen=0;
ret=_grib_get_long_array_internal(h,a,lval,size,&replen);
}
if (replen==1) fprintf(out, myformat, lval[0]);
else {
int i=0;
int cols=0;
for (i=0;i<replen;i++) {
*newline=1;
fprintf(out, myformat, lval[i]);
if (i<replen-1) fprintf(out, "%s", myseparator);
cols++;
if (cols>=maxcols) {
fprintf(out,"\n");
*newline=1;
cols=0;
}
}
}
grib_context_free( h->context,lval);
break;
case GRIB_TYPE_BYTES:
replen=a->length;
sval=(char*)grib_context_malloc( h->context,replen*sizeof(char));
ret = grib_unpack_string(a,sval,&replen);
p=sval;
while ((replen--) > 0) fprintf(out,"%c",*(p++));
grib_context_free(h->context,sval);
*newline=0;
break;
default:
grib_context_log(h->context, GRIB_LOG_WARNING,"grib_accessor_print: Problem to print \"%s\", invalid type %d", a->name,type);
}
return ret;
}
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int grib_accessors_list_print(grib_handle* h,grib_accessors_list* al,const char* name,int type,const char* format,const char* separator,int maxcols,int* newline,FILE* out)
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{
size_t size=0,len=0,replen=0;
char* sval=NULL;
char* p=NULL;
double* dval=0;
long* lval=0;
char** cvals=NULL;
int ret=0;
char* myformat=NULL;
char* myseparator=NULL;
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char double_format[]="%.12g"; /* default format for printing double keys */
char long_format[]="%ld"; /* default format for printing integer keys */
char default_separator[]=" ";
grib_accessor* a=al->accessor;
if (type==-1) type=grib_accessor_get_native_type(al->accessor);
grib_accessors_list_value_count(al,&size);
switch (type) {
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case GRIB_TYPE_STRING:
myseparator= separator ? (char*)separator : default_separator;
if (size==1) {
char sbuf[1024]={0,};
len = sizeof(sbuf);
ret = grib_unpack_string(al->accessor,sbuf,&len);
fprintf(out,"%s",sbuf);
} else {
int i=0;
int cols=0;
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cvals=(char**)grib_context_malloc_clear(h->context,sizeof(char*)*size);
grib_accessors_list_unpack_string(al,cvals,&size);
for (i=0;i<size;i++) {
*newline=1;
fprintf(out,"%s",cvals[i]);
if (i<size-1) fprintf(out, "%s", myseparator);
cols++;
if (cols>=maxcols) {
fprintf(out,"\n");
*newline=1;
cols=0;
}
}
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}
grib_context_free( h->context,cvals);
break;
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case GRIB_TYPE_DOUBLE:
myformat= format ? (char*)format : double_format;
myseparator= separator ? (char*)separator : default_separator;
dval=(double*)grib_context_malloc_clear(h->context,sizeof(double)*size);
ret = grib_accessors_list_unpack_double(al,dval,&size);
if (size==1) fprintf(out,myformat,dval[0]);
else {
int i=0;
int cols=0;
for (i=0;i<size;i++) {
*newline=1;
fprintf(out,myformat,dval[i]);
if (i<size-1) fprintf(out, "%s", myseparator);
cols++;
if (cols>=maxcols) {
fprintf(out,"\n");
*newline=1;
cols=0;
}
}
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}
grib_context_free( h->context,dval);
break;
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case GRIB_TYPE_LONG:
myformat= format ? (char*)format : long_format;
myseparator= separator ? (char*)separator : default_separator;
lval=(long*)grib_context_malloc_clear(h->context,sizeof(long)*size);
ret = grib_accessors_list_unpack_long(al,lval,&size);
if (size==1) fprintf(out, myformat, lval[0]);
else {
int i=0;
int cols=0;
for (i=0;i<size;i++) {
*newline=1;
fprintf(out, myformat, lval[i]);
if (i<size-1) fprintf(out, "%s", myseparator);
cols++;
if (cols>=maxcols) {
fprintf(out,"\n");
*newline=1;
cols=0;
}
}
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}
grib_context_free( h->context,lval);
break;
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case GRIB_TYPE_BYTES:
replen=a->length;
sval=(char*)grib_context_malloc( h->context,replen*sizeof(char));
ret = grib_unpack_string(al->accessor,sval,&replen);
p=sval;
while ((replen--) > 0) fprintf(out,"%c",*(p++));
grib_context_free(h->context,sval);
*newline=0;
break;
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default:
grib_context_log(h->context, GRIB_LOG_WARNING,"grib_accessor_print: Problem to print \"%s\", invalid type %d", a->name,type);
}
return ret;
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}
int grib_recompose_print(grib_handle* h, grib_accessor *observer, const char* uname, int fail,FILE* out)
{
grib_accessors_list* al=NULL;
char loc[1024];
int i = 0;
int ret=0;
int mode = -1;
char* pp=NULL;
char* format=NULL;
int type=-1;
char* separator=NULL;
int l;
char buff[10]={0,};
char buff1[1024]={0,};
int maxcolsd=8;
int maxcols;
int newline=1;
const size_t uname_len = strlen(uname);
maxcols=maxcolsd;
loc[0] = 0 ;
for(i=0; i<uname_len; i++)
{
if(mode > -1)
{
switch (uname[i]) {
case ':':
type=grib_type_to_int(uname[i+1]);
i++;
break;
case '\'':
pp=(char*)(uname+i+1);
while(*pp!='%' && *pp!='!' && *pp!=']' && *pp!=':' && *pp!='\'') pp++;
l=pp-uname-i;
if (*pp == '\'') separator=strncpy(buff1,uname+i+1,l-1);
i+=l;
break;
case '%':
pp=(char*)(uname+i+1);
while(*pp!='%' && *pp!='!' && *pp!=']' && *pp!=':' && *pp!='\'') pp++;
l=pp-uname-i;
format=strncpy(buff,uname+i,l);
i+=l-1;
break;
case '!':
pp=(char*)uname;
maxcols=strtol(uname+i+1,&pp,10);
if (maxcols==0) maxcols=maxcolsd;
while(pp && *pp!='%' && *pp!='!' && *pp!=']' && *pp!=':' && *pp!='\'' ) pp++;
i+=pp-uname-i-1;
break;
case ']':
loc[mode] = 0;
mode = -1;
al = grib_find_accessors_list(h,loc);
if(!al){
if (!fail) {
fprintf(out,"undef");
ret=GRIB_NOT_FOUND;
} else {
grib_context_log(h->context, GRIB_LOG_WARNING,"grib_recompose_print: Problem to recompose print with : %s, no accessor found", loc);
return GRIB_NOT_FOUND;
}
} else {
ret=grib_accessors_list_print(h,al,loc,type,format,separator,maxcols,&newline,out);
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if(ret != GRIB_SUCCESS)
{
/*
grib_context_log(h->context, GRIB_LOG_ERROR,"grib_recompose_print: Could not recompose print : %s", uname);
*/
return ret;
}
}
loc[0] = 0 ;
break;
default:
loc[mode++]=uname[i];
break;
}
} else if(uname[i]=='[') {
mode = 0;
} else {
fprintf(out,"%c",uname[i]);
type=-1;
}
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}
if (newline) fprintf(out,"\n");
return ret;
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}
grib_action_file* grib_find_action_file(const char* fname , grib_action_file_list* afl)
{
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grib_action_file* act = afl->first;
while(act)
{
if(strcmp(act->filename,fname)==0)
return act;
act = act->next;
}
return 0;
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}
void grib_push_action_file(grib_action_file* af, grib_action_file_list* afl)
{
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if (!afl->first)
afl->first = afl->last = af;
else
afl->last->next = af;
afl->last = af;
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}
#define MAXINCLUDE 10
typedef struct {
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char *name;
FILE *file;
char *io_buffer;
int line;
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} context;
static context stack[MAXINCLUDE];
static int top = 0;
extern FILE *grib_yyin;
extern int grib_yylineno;
extern void grib_yyrestart(FILE*);
static int error = 0;
int grib_yywrap()
{
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/* int i; */
top--;
/* for(i = 0; i < top ; i++) printf(" "); */
/* printf("CLOSE %s\n",parse_file); */
fclose(stack[top].file);
/* if (stack[top].io_buffer) free(stack[top].io_buffer); */
grib_yylineno = stack[top].line;
if(top)
{
parse_file = stack[top-1].name;
grib_yyin = stack[top-1].file;
Assert(parse_file);
Assert(grib_yyin);
/* grib_yyrestart(grib_yyin); */
/* for(i = 0; i < top ; i++) printf(" "); */
/* printf("BACK TO %s\n",parse_file); */
grib_context_free(grib_parser_context,stack[top].name);
return 0;
}
else {
grib_context_free(grib_parser_context,stack[top].name);
parse_file = 0;
grib_yyin = NULL;
return 1;
}
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}
char* file_being_parsed()
{
return (char*)parse_file;
}
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int grib_yyerror(const char* msg)
{
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grib_context_log(grib_parser_context, GRIB_LOG_ERROR,
"grib_parser: %s at line %d of %s", msg, grib_yylineno + 1,parse_file);
grib_context_log(grib_parser_context, GRIB_LOG_ERROR,
"ecCodes Version: %s", ECCODES_VERSION_STR);
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error = 1;
return 1;
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}
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void grib_parser_include(const char* included_fname)
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{
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FILE *f = NULL;
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char* io_buffer=0;
/* int i; */
Assert(top < MAXINCLUDE);
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Assert(included_fname);
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if(parse_file == 0)
{
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parse_file = included_fname;
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Assert(top == 0);
}
else
{
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/* When parse_file is not NULL, it's the path of the parent file (includer) */
/* and 'included_fname' is the name of the file being included (includee) */
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/* GRIB-796: Search for the included file in ECCODES_DEFINITION_PATH */
char* new_path = NULL;
Assert(*included_fname != '/');
new_path = grib_context_full_defs_path(grib_parser_context, included_fname);
if (!new_path) {
fprintf(stderr, "ecCodes Version: %s\nDefinition files path: %s\n",
ECCODES_VERSION_STR,
grib_parser_context->grib_definition_files_path);
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grib_context_log(grib_parser_context, GRIB_LOG_FATAL,
"grib_parser_include: Could not resolve '%s' (included in %s)", included_fname, parse_file);
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return;
}
parse_file = new_path;
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}
if (strcmp(parse_file,"-")==0) {
grib_context_log(grib_parser_context,GRIB_LOG_DEBUG,"parsing standard input");
f = stdin; /* read from std input */
} else {
grib_context_log(grib_parser_context,GRIB_LOG_DEBUG,"parsing include file %s",parse_file);
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f = codes_fopen(parse_file,"r");
}
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/* for(i = 0; i < top ; i++) printf(" "); */
/* printf("PARSING %s\n",parse_file); */
if(f == NULL)
{
char buffer[1024];
grib_context_log(grib_parser_context, (GRIB_LOG_ERROR)|(GRIB_LOG_PERROR),"grib_parser_include: cannot open: '%s'", parse_file);
sprintf(buffer,"Cannot include file: '%s'",parse_file);
grib_yyerror(buffer);
}
else
{
/*
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c=grib_context_get_default();
if (c->io_buffer_size) {
if (posix_memalign(&(io_buffer),sysconf(_SC_PAGESIZE),c->io_buffer_size) ) {
grib_context_log(c,GRIB_LOG_FATAL,"grib_parser_include: posix_memalign unable to allocate io_buffer\n");
}
setvbuf(f,io_buffer,_IOFBF,c->io_buffer_size);
}
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*/
grib_yyin = f;
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stack[top].file = f;
stack[top].io_buffer = io_buffer;
stack[top].name = grib_context_strdup(grib_parser_context,parse_file);
parse_file = stack[top].name;
stack[top].line = grib_yylineno;
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grib_yylineno = 0;
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top++;
/* grib_yyrestart(f); */
}
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}
extern int grib_yyparse(void);
static int parse(grib_context* gc, const char* filename)
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{
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int err = 0;
GRIB_MUTEX_INIT_ONCE(&once,&init);
GRIB_MUTEX_LOCK(&mutex_parse);
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#ifdef YYDEBUG
{
extern int grib_yydebug;
grib_yydebug = getenv("YYDEBUG") != NULL;
}
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#endif
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gc = gc ? gc : grib_context_get_default();
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grib_yyin = NULL;
top = 0;
parse_file = 0;
grib_parser_include(filename);
if (!grib_yyin) {
/* Could not read from file */
parse_file = 0;
GRIB_MUTEX_UNLOCK(&mutex_parse);
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return GRIB_FILE_NOT_FOUND;
}
err = grib_yyparse();
parse_file = 0;
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if (err) grib_context_log(gc,GRIB_LOG_ERROR,"Parsing error %d > %s\n",err, filename);
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GRIB_MUTEX_UNLOCK(&mutex_parse);
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return err;
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}
static grib_action* grib_parse_stream(grib_context* gc, const char* filename)
{
GRIB_MUTEX_INIT_ONCE(&once,&init);
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GRIB_MUTEX_LOCK(&mutex_stream);
grib_parser_all_actions = 0;
if (parse(gc,filename) == 0) {
if (grib_parser_all_actions) {
GRIB_MUTEX_UNLOCK(&mutex_stream)
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return grib_parser_all_actions;
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} else {
grib_action* ret=grib_action_create_noop(gc,filename);
GRIB_MUTEX_UNLOCK(&mutex_stream)
return ret;
}
} else {
GRIB_MUTEX_UNLOCK(&mutex_stream);
return NULL;
}
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}
grib_concept_value* grib_parse_concept_file( grib_context* gc,const char* filename)
{
GRIB_MUTEX_INIT_ONCE(&once,&init);
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GRIB_MUTEX_LOCK(&mutex_concept);
gc = gc ? gc : grib_context_get_default();
grib_parser_context = gc;
if(parse(gc,filename) == 0) {
GRIB_MUTEX_UNLOCK(&mutex_concept);
return grib_parser_concept;
} else {
GRIB_MUTEX_UNLOCK(&mutex_concept);
return NULL;
}
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}
grib_hash_array_value* grib_parse_hash_array_file( grib_context* gc,const char* filename)
{
GRIB_MUTEX_INIT_ONCE(&once,&init);
GRIB_MUTEX_LOCK(&mutex_hash_array);
gc = gc ? gc : grib_context_get_default();
grib_parser_context = gc;
if(parse(gc,filename) == 0) {
GRIB_MUTEX_UNLOCK(&mutex_hash_array);
return grib_parser_hash_array;
} else {
GRIB_MUTEX_UNLOCK(&mutex_hash_array);
return NULL;
}
}
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grib_rule* grib_parse_rules_file( grib_context* gc,const char* filename)
{
if (!gc) gc=grib_context_get_default();
GRIB_MUTEX_INIT_ONCE(&once,&init);
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GRIB_MUTEX_LOCK(&mutex_rules);
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gc = gc ? gc : grib_context_get_default();
grib_parser_context = gc;
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if(parse(gc,filename) == 0) {
GRIB_MUTEX_UNLOCK(&mutex_rules);
return grib_parser_rules;
} else {
GRIB_MUTEX_UNLOCK(&mutex_rules);
return NULL;
}
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}
grib_action* grib_parse_file( grib_context* gc,const char* filename)
{
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grib_action_file* af;
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GRIB_MUTEX_INIT_ONCE(&once,&init);
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GRIB_MUTEX_LOCK(&mutex_file);
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af =0;
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gc = gc ? gc : grib_context_get_default();
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grib_parser_context = gc;
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if(!gc->grib_reader)
gc->grib_reader =(grib_action_file_list*)grib_context_malloc_clear_persistent(gc,sizeof(grib_action_file_list));
else {
af = grib_find_action_file(filename, gc->grib_reader);
}
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if(!af)
{
grib_action *a;
grib_context_log(gc,GRIB_LOG_DEBUG,"Loading %s",filename);
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a = grib_parse_stream(gc,filename);
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if(error)
{
if (a) grib_action_delete(gc,a);
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GRIB_MUTEX_UNLOCK(&mutex_file);
return NULL;
}
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af =(grib_action_file*)grib_context_malloc_clear_persistent(gc,sizeof(grib_action_file));
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af->root = a;
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af->filename=grib_context_strdup_persistent(gc,filename);
grib_push_action_file(af,gc->grib_reader);
}
else grib_context_log(gc,GRIB_LOG_DEBUG,"Using cached version of %s",filename);
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GRIB_MUTEX_UNLOCK(&mutex_file);
return af->root;
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}
int grib_type_to_int(char id)
{
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switch (id) {
case 'd':
return GRIB_TYPE_DOUBLE;
break;
case 'f':
return GRIB_TYPE_DOUBLE;
break;
case 'l':
return GRIB_TYPE_LONG;
break;
case 'i':
return GRIB_TYPE_LONG;
break;
case 's':
return GRIB_TYPE_STRING;
break;
}
return GRIB_TYPE_UNDEFINED;
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}